Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 AL391825.1-201ENST00000457671 1364 ntBASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 NFIC-211ENST00000641145 8399 ntBASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 REXO1L1P-202ENST00000608646 1974 ntBASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 AZGP1P1-201ENST00000411909 902 ntBASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 DOC2GP-202ENST00000514950 1163 ntBASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 AC104794.3-201ENST00000566840 1248 ntBASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 AC092337.1-201ENST00000568699 1129 ntBASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 AC004461.2-201ENST00000629517 803 ntBASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 AL162727.3-201ENST00000635661 2787 ntBASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP1Q96SZ6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 DFFBP1-201ENST00000433250 979 ntBASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 AL353779.1-201ENST00000434793 351 ntBASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 SRD5A3P1-201ENST00000603021 949 ntBASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 MST1L-201ENST00000442552 2185 ntBASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP1Q96SZ6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms