Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 AL607033.1-201ENST00000623900 1599 ntBASIC18.59■□□□□ 0.57
CCDC17Q96LX7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 FAM86LP-201ENST00000478302 853 ntBASIC18.59■□□□□ 0.57
CCDC17Q96LX7 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 AL033527.5-201ENST00000641382 801 ntBASIC18.59■□□□□ 0.57
CCDC17Q96LX7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC17Q96LX7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC17Q96LX7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 AC106886.1-201ENST00000568660 600 ntBASIC18.58■□□□□ 0.56
CCDC17Q96LX7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.58■□□□□ 0.56
CCDC17Q96LX7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC17Q96LX7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms