Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 PRAL-201ENST00000624952 3286 ntBASIC14.11□□□□□ -0.15
SPTSSAQ969W0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.1□□□□□ -0.15
SPTSSAQ969W0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 MIR574-201ENST00000385209 96 ntBASIC14.1□□□□□ -0.15
SPTSSAQ969W0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 MKNK2P1-201ENST00000437526 628 ntBASIC14.1□□□□□ -0.15
SPTSSAQ969W0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 AC243562.2-201ENST00000561247 970 ntBASIC14.1□□□□□ -0.15
SPTSSAQ969W0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 AC132872.4-202ENST00000622924 2756 ntBASIC14.1□□□□□ -0.15
SPTSSAQ969W0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSAQ969W0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 CICP6-201ENST00000457191 2729 ntBASIC14.09□□□□□ -0.15
SPTSSAQ969W0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms