Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNKSR1Q969H4 REXO1L1P-202ENST00000608646 1974 ntBASIC19.43■□□□□ 0.7
CNKSR1Q969H4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 KRT18P25-201ENST00000508931 1278 ntBASIC19.42■□□□□ 0.7
CNKSR1Q969H4 SCARNA20.5-201ENST00000516991 142 ntBASIC19.42■□□□□ 0.7
CNKSR1Q969H4 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.42■□□□□ 0.7
CNKSR1Q969H4 AC107373.2-201ENST00000607735 490 ntBASIC19.42■□□□□ 0.7
CNKSR1Q969H4 AC005695.3-201ENST00000614522 232 ntBASIC19.42■□□□□ 0.7
CNKSR1Q969H4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNKSR1Q969H4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 HLA-A-202ENST00000376806 1854 ntBASIC19.41■□□□□ 0.7
CNKSR1Q969H4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 AC091804.1-201ENST00000486888 567 ntBASIC19.41■□□□□ 0.7
CNKSR1Q969H4 ACTG1P17-201ENST00000558391 1119 ntBASIC19.41■□□□□ 0.7
CNKSR1Q969H4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 MIR4741-201ENST00000579822 90 ntBASIC19.41■□□□□ 0.7
CNKSR1Q969H4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 AC068880.1-201ENST00000507289 2297 ntBASIC19.41■□□□□ 0.7
CNKSR1Q969H4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.41■□□□□ 0.7
CNKSR1Q969H4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 AP006547.1-201ENST00000563435 692 ntBASIC19.4■□□□□ 0.7
CNKSR1Q969H4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 AC015910.1-201ENST00000579400 975 ntBASIC19.4■□□□□ 0.7
CNKSR1Q969H4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 AC097359.3-201ENST00000603982 1210 ntBASIC19.4■□□□□ 0.7
CNKSR1Q969H4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 AC145423.3-201ENST00000615987 467 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms