Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC23.18■■□□□ 1.3
ARHGEF40Q8TER5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC23.18■■□□□ 1.3
ARHGEF40Q8TER5 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ARHGEF40Q8TER5 ISCA2P1-201ENST00000425548 448 ntBASIC23.18■■□□□ 1.3
ARHGEF40Q8TER5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC23.18■■□□□ 1.3
ARHGEF40Q8TER5 AC125604.1-201ENST00000496255 707 ntBASIC23.18■■□□□ 1.3
ARHGEF40Q8TER5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC23.18■■□□□ 1.3
ARHGEF40Q8TER5 BNIP3P13-201ENST00000599968 566 ntBASIC23.18■■□□□ 1.3
ARHGEF40Q8TER5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC23.18■■□□□ 1.3
ARHGEF40Q8TER5 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 NOC2LP2-201ENST00000407594 1944 ntBASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 FST-202ENST00000396947 2538 ntTSL 5 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 AL136309.1-201ENST00000403917 691 ntBASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 CHMP1AP1-201ENST00000445563 662 ntBASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 AL353637.1-201ENST00000451571 732 ntBASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 AC132192.2-201ENST00000596206 1147 ntBASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC23.17■■□□□ 1.3
ARHGEF40Q8TER5 KRT8P29-201ENST00000420409 1371 ntBASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 EIF3FP3-201ENST00000434851 1086 ntBASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 AC242376.1-201ENST00000559033 726 ntBASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 AC025181.2-201ENST00000606994 802 ntBASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 AL023803.2-201ENST00000620080 638 ntBASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ARHGEF40Q8TER5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 NPPA-201ENST00000376476 728 ntTSL 3 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 AC005357.2-202ENST00000590507 1060 ntBASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 PRSS30P-206ENST00000641773 873 ntBASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 AL805961.1-201ENST00000642026 753 ntBASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ARHGEF40Q8TER5 KRT8P14-201ENST00000414254 1442 ntBASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 AC100850.1-201ENST00000506768 649 ntBASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 MIR4783-201ENST00000580343 82 ntBASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ARHGEF40Q8TER5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ARHGEF40Q8TER5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ARHGEF40Q8TER5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms