Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.22■□□□□ 0.67
SNED1Q8TER0 SLC25A24P2-201ENST00000415059 510 ntBASIC19.22■□□□□ 0.67
SNED1Q8TER0 AC004898.1-201ENST00000451057 766 ntBASIC19.22■□□□□ 0.67
SNED1Q8TER0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.22■□□□□ 0.67
SNED1Q8TER0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.22■□□□□ 0.67
SNED1Q8TER0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNED1Q8TER0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 HIST2H2BC-201ENST00000498492 580 ntBASIC19.21■□□□□ 0.67
SNED1Q8TER0 AC023310.1-201ENST00000554836 735 ntBASIC19.21■□□□□ 0.67
SNED1Q8TER0 CHMP4BP1-201ENST00000556017 588 ntBASIC19.21■□□□□ 0.67
SNED1Q8TER0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.21■□□□□ 0.67
SNED1Q8TER0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNED1Q8TER0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.66
SNED1Q8TER0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SNED1Q8TER0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.2■□□□□ 0.66
SNED1Q8TER0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.2■□□□□ 0.66
SNED1Q8TER0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.2■□□□□ 0.66
SNED1Q8TER0 SCARNA20.5-201ENST00000516991 142 ntBASIC19.2■□□□□ 0.66
SNED1Q8TER0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.2■□□□□ 0.66
SNED1Q8TER0 MIR4741-201ENST00000579822 90 ntBASIC19.2■□□□□ 0.66
SNED1Q8TER0 RN7SL190P-201ENST00000582519 257 ntBASIC19.2■□□□□ 0.66
SNED1Q8TER0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SNED1Q8TER0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNED1Q8TER0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.2■□□□□ 0.66
SNED1Q8TER0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms