Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC067863.1-201ENST00000494933 530 ntBASIC17■□□□□ 0.31
UBA3Q8TBC4 BAD-207ENST00000544785 525 ntTSL 3 BASIC17■□□□□ 0.31
UBA3Q8TBC4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17■□□□□ 0.31
UBA3Q8TBC4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UBA3Q8TBC4 AC018892.3-201ENST00000623986 2499 ntBASIC17■□□□□ 0.31
UBA3Q8TBC4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17■□□□□ 0.31
UBA3Q8TBC4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17■□□□□ 0.31
UBA3Q8TBC4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UBA3Q8TBC4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 ZBTB45P2-201ENST00000452245 1531 ntBASIC17■□□□□ 0.31
UBA3Q8TBC4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 FER1L4-210ENST00000615531 5998 ntBASIC16.99■□□□□ 0.31
UBA3Q8TBC4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 MIR943-201ENST00000401286 94 ntBASIC16.99■□□□□ 0.31
UBA3Q8TBC4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 AC069120.2-201ENST00000524091 540 ntBASIC16.99■□□□□ 0.31
UBA3Q8TBC4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.99■□□□□ 0.31
UBA3Q8TBC4 AL079307.3-201ENST00000556114 283 ntBASIC16.99■□□□□ 0.31
UBA3Q8TBC4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 AC140878.1-201ENST00000565277 250 ntBASIC16.99■□□□□ 0.31
UBA3Q8TBC4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 AC027796.2-201ENST00000575326 344 ntBASIC16.99■□□□□ 0.31
UBA3Q8TBC4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 SPDYE12P-201ENST00000618416 771 ntBASIC16.99■□□□□ 0.31
UBA3Q8TBC4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 FO538757.1-201ENST00000623083 1397 ntBASIC16.99■□□□□ 0.31
UBA3Q8TBC4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBA3Q8TBC4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 AC132872.4-202ENST00000622924 2756 ntBASIC16.98■□□□□ 0.31
UBA3Q8TBC4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.98■□□□□ 0.31
UBA3Q8TBC4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 RPL37AP1-201ENST00000412502 279 ntBASIC16.98■□□□□ 0.31
UBA3Q8TBC4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 AL138828.2-201ENST00000615812 383 ntBASIC16.98■□□□□ 0.31
UBA3Q8TBC4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.98■□□□□ 0.31
UBA3Q8TBC4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 CETN4P-206ENST00000642099 2168 ntBASIC16.98■□□□□ 0.31
UBA3Q8TBC4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA3Q8TBC4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms