Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AC010336.2-201ENST00000564226 506 ntBASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AL844908.2-201ENST00000609461 460 ntBASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AL390754.1-201ENST00000619088 582 ntBASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC4A11Q8NBS3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 AP003680.1-201ENST00000598970 3660 ntBASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 AC241585.1-201ENST00000433527 519 ntBASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 MIR4313-201ENST00000580760 101 ntBASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 AC097359.3-201ENST00000603982 1210 ntBASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC4A11Q8NBS3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 AC087499.5-201ENST00000452760 1342 ntBASIC16.96■□□□□ 0.3
SLC4A11Q8NBS3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC4A11Q8NBS3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC4A11Q8NBS3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC4A11Q8NBS3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLC4A11Q8NBS3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms