Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.31■□□□□ 0.36
HERC6Q8IVU3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 AP001889.1-201ENST00000525414 633 ntBASIC17.31■□□□□ 0.36
HERC6Q8IVU3 AC068587.3-201ENST00000526613 355 ntBASIC17.31■□□□□ 0.36
HERC6Q8IVU3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 PTP4A1P2-201ENST00000546033 454 ntBASIC17.31■□□□□ 0.36
HERC6Q8IVU3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 BRI3BPP1-201ENST00000594224 787 ntBASIC17.31■□□□□ 0.36
HERC6Q8IVU3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 RPL13P2-201ENST00000440687 659 ntBASIC17.3■□□□□ 0.36
HERC6Q8IVU3 GOLGA2P4-201ENST00000441462 777 ntBASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AC007551.1-201ENST00000457394 519 ntBASIC17.3■□□□□ 0.36
HERC6Q8IVU3 FAM86LP-201ENST00000478302 853 ntBASIC17.3■□□□□ 0.36
HERC6Q8IVU3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 ENPP7P5-201ENST00000541031 1031 ntBASIC17.3■□□□□ 0.36
HERC6Q8IVU3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 MIR3615-201ENST00000581999 87 ntBASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AL365330.1-201ENST00000607459 531 ntBASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AL139099.5-201ENST00000635274 300 ntBASIC17.3■□□□□ 0.36
HERC6Q8IVU3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 AL645728.1-201ENST00000366221 2101 ntBASIC17.3■□□□□ 0.36
HERC6Q8IVU3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.3■□□□□ 0.36
HERC6Q8IVU3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 U82695.1-201ENST00000635752 1889 ntBASIC17.29■□□□□ 0.36
HERC6Q8IVU3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 AC243960.2-201ENST00000600996 747 ntBASIC17.29■□□□□ 0.36
HERC6Q8IVU3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HERC6Q8IVU3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms