Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 AC098614.1-201ENST00000368528 745 ntBASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 INE1-201ENST00000456273 945 ntBASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 AC093726.1-201ENST00000608064 963 ntBASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 IGHV3-72-202ENST00000621503 303 ntBASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 AC006449.5-201ENST00000610658 2098 ntBASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 AC084018.2-201ENST00000613093 2607 ntBASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 AC136604.1-201ENST00000418535 575 ntBASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 AL158212.4-201ENST00000624062 1286 ntBASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE3BQ7Z3V4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBE3BQ7Z3V4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
UBE3BQ7Z3V4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBE3BQ7Z3V4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
UBE3BQ7Z3V4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
UBE3BQ7Z3V4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 KRT17P7-201ENST00000451704 1104 ntBASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 RN7SL752P-201ENST00000463779 287 ntBASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 RRP7BP-205ENST00000566851 833 ntBASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 AC097359.3-201ENST00000603982 1210 ntBASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBE3BQ7Z3V4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms