Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 HLA-H-201ENST00000383620 1096 ntBASIC18.09■□□□□ 0.49
SHC4Q6S5L8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 HTR5BP-201ENST00000430851 1154 ntBASIC18.09■□□□□ 0.49
SHC4Q6S5L8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 KRT8P23-201ENST00000560090 1207 ntBASIC18.09■□□□□ 0.49
SHC4Q6S5L8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 TNRC18P2-201ENST00000417666 2714 ntBASIC18.09■□□□□ 0.49
SHC4Q6S5L8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC4Q6S5L8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 AC112693.3-201ENST00000624819 1983 ntBASIC18.08■□□□□ 0.49
SHC4Q6S5L8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.08■□□□□ 0.49
SHC4Q6S5L8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 MKNK2P1-201ENST00000437526 628 ntBASIC18.08■□□□□ 0.48
SHC4Q6S5L8 ACTG1P14-201ENST00000446382 1122 ntBASIC18.08■□□□□ 0.48
SHC4Q6S5L8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SHC4Q6S5L8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms