Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 AC012645.4-201ENST00000610691 1061 ntBASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CHRFAM7AQ494W8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 KRT8P49-201ENST00000604166 1432 ntBASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 DUX4L17-201ENST00000557360 1267 ntBASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 AC093520.2-201ENST00000561830 333 ntBASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 AL139011.1-202ENST00000642063 584 ntBASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CHRFAM7AQ494W8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 CNN2P2-201ENST00000443536 909 ntBASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 CNN2P3-201ENST00000450201 906 ntBASIC14.15□□□□□ -0.14
CHRFAM7AQ494W8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms