Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TUBB1P2-201ENST00000422712 1306 ntBASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 TUBB1P1-201ENST00000503144 1300 ntBASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 AC093525.8-201ENST00000624099 1342 ntBASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 AC020907.1-201ENST00000616460 1350 ntBASIC17.14■□□□□ 0.33
CTC1Q2NKJ3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 AL662844.4-201ENST00000606367 2838 ntBASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 RN7SL219P-201ENST00000582872 296 ntBASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 AC006277.1-201ENST00000624348 1610 ntBASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.13■□□□□ 0.33
CTC1Q2NKJ3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 AC093724.1-201ENST00000448659 1027 ntBASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 RARRES2P5-201ENST00000564013 466 ntBASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 AC233724.13-201ENST00000598383 410 ntBASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 AC018665.1-201ENST00000622927 1362 ntBASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTC1Q2NKJ3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 AL589702.1-201ENST00000641229 1509 ntBASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 AC105917.1-201ENST00000506637 2539 ntBASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTC1Q2NKJ3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms