Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNA1Q09470 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 HYMAI-201ENST00000635591 3347 ntBASIC17.62■□□□□ 0.41
KCNA1Q09470 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KCNA1Q09470 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNA1Q09470 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.62■□□□□ 0.41
KCNA1Q09470 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNA1Q09470 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KCNA1Q09470 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA1Q09470 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNA1Q09470 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA1Q09470 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.62■□□□□ 0.41
KCNA1Q09470 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.62■□□□□ 0.41
KCNA1Q09470 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA1Q09470 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KCNA1Q09470 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
KCNA1Q09470 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.62■□□□□ 0.41
KCNA1Q09470 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KCNA1Q09470 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNA1Q09470 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA1Q09470 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KCNA1Q09470 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KCNA1Q09470 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNA1Q09470 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNA1Q09470 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
KCNA1Q09470 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
KCNA1Q09470 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA1Q09470 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
KCNA1Q09470 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
KCNA1Q09470 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
KCNA1Q09470 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNA1Q09470 RPL37AP1-201ENST00000412502 279 ntBASIC17.61■□□□□ 0.41
KCNA1Q09470 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA1Q09470 CNN2P2-201ENST00000443536 909 ntBASIC17.61■□□□□ 0.41
KCNA1Q09470 CNN2P3-201ENST00000450201 906 ntBASIC17.61■□□□□ 0.41
KCNA1Q09470 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA1Q09470 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA1Q09470 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 DUX4L27-201ENST00000554796 1261 ntBASIC17.61■□□□□ 0.41
KCNA1Q09470 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.61■□□□□ 0.41
KCNA1Q09470 AC026979.3-201ENST00000607315 403 ntBASIC17.61■□□□□ 0.41
KCNA1Q09470 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNA1Q09470 AL136317.3-201ENST00000618497 906 ntBASIC17.61■□□□□ 0.41
KCNA1Q09470 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
KCNA1Q09470 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
KCNA1Q09470 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 NFIC-211ENST00000641145 8399 ntBASIC17.61■□□□□ 0.41
KCNA1Q09470 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA1Q09470 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA1Q09470 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA1Q09470 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNA1Q09470 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA1Q09470 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA1Q09470 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNA1Q09470 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.6■□□□□ 0.41
KCNA1Q09470 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.6■□□□□ 0.41
KCNA1Q09470 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA1Q09470 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNA1Q09470 HIST3H2BA-201ENST00000436555 524 ntBASIC17.6■□□□□ 0.41
KCNA1Q09470 KLF2P3-201ENST00000451977 1087 ntBASIC17.6■□□□□ 0.41
KCNA1Q09470 AC125807.1-201ENST00000483097 614 ntBASIC17.6■□□□□ 0.41
KCNA1Q09470 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 AL079307.3-201ENST00000556114 283 ntBASIC17.6■□□□□ 0.41
KCNA1Q09470 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KCNA1Q09470 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 SPDYE12P-201ENST00000618416 771 ntBASIC17.6■□□□□ 0.41
KCNA1Q09470 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KCNA1Q09470 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA1Q09470 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KCNA1Q09470 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms