Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 AP001282.1-201ENST00000531301 1499 ntBASIC19.67■□□□□ 0.74
DDR1Q08345 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
DDR1Q08345 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.66■□□□□ 0.74
DDR1Q08345 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.66■□□□□ 0.74
DDR1Q08345 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.66■□□□□ 0.74
DDR1Q08345 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DDR1Q08345 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
DDR1Q08345 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DDR1Q08345 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.66■□□□□ 0.74
DDR1Q08345 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.66■□□□□ 0.74
DDR1Q08345 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DDR1Q08345 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DDR1Q08345 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.66■□□□□ 0.74
DDR1Q08345 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.66■□□□□ 0.74
DDR1Q08345 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.66■□□□□ 0.74
DDR1Q08345 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 GAPDHP40-201ENST00000505218 1006 ntBASIC19.66■□□□□ 0.74
DDR1Q08345 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.66■□□□□ 0.74
DDR1Q08345 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
DDR1Q08345 CHMP4BP1-201ENST00000556017 588 ntBASIC19.66■□□□□ 0.74
DDR1Q08345 EEF1DP1-201ENST00000585891 896 ntBASIC19.66■□□□□ 0.74
DDR1Q08345 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.66■□□□□ 0.74
DDR1Q08345 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
DDR1Q08345 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DDR1Q08345 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
DDR1Q08345 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.66■□□□□ 0.74
DDR1Q08345 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.66■□□□□ 0.74
DDR1Q08345 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDR1Q08345 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.65■□□□□ 0.74
DDR1Q08345 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.65■□□□□ 0.74
DDR1Q08345 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.65■□□□□ 0.74
DDR1Q08345 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.65■□□□□ 0.74
DDR1Q08345 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.65■□□□□ 0.74
DDR1Q08345 AP005019.2-201ENST00000615104 511 ntBASIC19.65■□□□□ 0.74
DDR1Q08345 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.65■□□□□ 0.74
DDR1Q08345 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
DDR1Q08345 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DDR1Q08345 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
DDR1Q08345 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDR1Q08345 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.64■□□□□ 0.74
DDR1Q08345 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DDR1Q08345 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DDR1Q08345 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DDR1Q08345 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
DDR1Q08345 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
DDR1Q08345 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.64■□□□□ 0.73
DDR1Q08345 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
DDR1Q08345 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DDR1Q08345 FXNP2-201ENST00000411625 547 ntBASIC19.64■□□□□ 0.73
DDR1Q08345 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.64■□□□□ 0.73
DDR1Q08345 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.64■□□□□ 0.73
DDR1Q08345 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.64■□□□□ 0.73
DDR1Q08345 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.64■□□□□ 0.73
DDR1Q08345 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.64■□□□□ 0.73
DDR1Q08345 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 AC015818.8-201ENST00000587907 1519 ntBASIC19.64■□□□□ 0.73
DDR1Q08345 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.64■□□□□ 0.73
DDR1Q08345 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.64■□□□□ 0.73
DDR1Q08345 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDR1Q08345 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.63■□□□□ 0.73
DDR1Q08345 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 AC005052.1-201ENST00000625181 2492 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms