Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 AC011742.3-201ENST00000439053 820 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 AC079112.1-201ENST00000454972 939 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
HSPG2P98160 RPL18P13-201ENST00000478088 569 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC9.67□□□□□ -0.86
HSPG2P98160 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 TUBB8P12-201ENST00000308911 1335 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 TUBB7P-202ENST00000428444 1305 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 TUBB8P7-204ENST00000567960 1332 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 AL008707.1-201ENST00000422498 534 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 DNAJB1P1-201ENST00000429417 1024 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC9.67□□□□□ -0.86
HSPG2P98160 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC9.67□□□□□ -0.86
HSPG2P98160 DIO1-215ENST00000610607 796 ntTSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 ENPP7P14-201ENST00000621765 1040 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
HSPG2P98160 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC9.67□□□□□ -0.86
HSPG2P98160 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 GHSR-202ENST00000427970 912 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC9.67□□□□□ -0.86
HSPG2P98160 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 C2orf69P1-201ENST00000563532 1093 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 AP001002.3-201ENST00000623482 206 ntBASIC9.67□□□□□ -0.86
HSPG2P98160 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC9.67□□□□□ -0.86
HSPG2P98160 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HSPG2P98160 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
HSPG2P98160 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
HSPG2P98160 TPM3P8-201ENST00000330554 643 ntBASIC9.66□□□□□ -0.86
HSPG2P98160 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 NDUFS6P1-201ENST00000485187 316 ntBASIC9.66□□□□□ -0.86
HSPG2P98160 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC9.66□□□□□ -0.86
HSPG2P98160 MIR4683-201ENST00000579659 81 ntBASIC9.66□□□□□ -0.86
HSPG2P98160 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
HSPG2P98160 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC9.66□□□□□ -0.86
HSPG2P98160 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
HSPG2P98160 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC9.66□□□□□ -0.86
HSPG2P98160 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC9.66□□□□□ -0.86
HSPG2P98160 AC008764.6-201ENST00000595909 2069 ntBASIC9.66□□□□□ -0.86
HSPG2P98160 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 PIN4P1-201ENST00000451079 396 ntBASIC9.66□□□□□ -0.86
HSPG2P98160 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC9.66□□□□□ -0.86
HSPG2P98160 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC9.66□□□□□ -0.86
HSPG2P98160 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC9.66□□□□□ -0.86
HSPG2P98160 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC9.66□□□□□ -0.86
HSPG2P98160 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC9.66□□□□□ -0.86
HSPG2P98160 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HSPG2P98160 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms