Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 GPS2P2-201ENST00000430745 888 ntBASIC14.18□□□□□ -0.14
RAB1AP62820 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB1AP62820 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB1AP62820 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAB1AP62820 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.18□□□□□ -0.14
RAB1AP62820 HLA-J-203ENST00000494367 1087 ntBASIC14.18□□□□□ -0.14
RAB1AP62820 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB1AP62820 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB1AP62820 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB1AP62820 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB1AP62820 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB1AP62820 AC004449.1-201ENST00000564240 433 ntBASIC14.18□□□□□ -0.14
RAB1AP62820 AC026150.2-201ENST00000564693 1156 ntBASIC14.18□□□□□ -0.14
RAB1AP62820 AC061975.2-201ENST00000581722 295 ntBASIC14.18□□□□□ -0.14
RAB1AP62820 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB1AP62820 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB1AP62820 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB1AP62820 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.18□□□□□ -0.14
RAB1AP62820 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB1AP62820 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 AC023824.1-201ENST00000562945 2975 ntBASIC14.18□□□□□ -0.14
RAB1AP62820 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB1AP62820 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB1AP62820 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB1AP62820 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
RAB1AP62820 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 AL513523.2-202ENST00000427283 2040 ntBASIC14.17□□□□□ -0.14
RAB1AP62820 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB1AP62820 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB1AP62820 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB1AP62820 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.17□□□□□ -0.14
RAB1AP62820 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB1AP62820 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB1AP62820 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB1AP62820 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.17□□□□□ -0.14
RAB1AP62820 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB1AP62820 AP001059.3-201ENST00000619053 235 ntBASIC14.17□□□□□ -0.14
RAB1AP62820 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB1AP62820 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB1AP62820 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB1AP62820 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB1AP62820 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB1AP62820 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB1AP62820 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB1AP62820 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB1AP62820 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB1AP62820 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB1AP62820 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB1AP62820 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
RAB1AP62820 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB1AP62820 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB1AP62820 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB1AP62820 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB1AP62820 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB1AP62820 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB1AP62820 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms