Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC131009.4-201ENST00000624048 1740 ntBASIC14.46□□□□□ -0.09
VBP1P61758 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 AC020765.3-201ENST00000613051 740 ntBASIC14.46□□□□□ -0.09
VBP1P61758 AL138966.2-201ENST00000621997 464 ntBASIC14.46□□□□□ -0.09
VBP1P61758 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 AC005252.3-201ENST00000623855 2258 ntBASIC14.46□□□□□ -0.09
VBP1P61758 AC009090.5-201ENST00000624886 2285 ntBASIC14.46□□□□□ -0.09
VBP1P61758 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.46□□□□□ -0.09
VBP1P61758 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.46□□□□□ -0.09
VBP1P61758 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VBP1P61758 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VBP1P61758 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
VBP1P61758 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
VBP1P61758 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VBP1P61758 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 AL590787.1-201ENST00000568856 1315 ntBASIC14.45□□□□□ -0.1
VBP1P61758 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.45□□□□□ -0.1
VBP1P61758 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
VBP1P61758 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.45□□□□□ -0.1
VBP1P61758 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.45□□□□□ -0.1
VBP1P61758 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.45□□□□□ -0.1
VBP1P61758 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.45□□□□□ -0.1
VBP1P61758 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.45□□□□□ -0.1
VBP1P61758 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
VBP1P61758 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.45□□□□□ -0.1
VBP1P61758 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 RN7SL606P-201ENST00000472779 293 ntBASIC14.45□□□□□ -0.1
VBP1P61758 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.45□□□□□ -0.1
VBP1P61758 AC090192.1-201ENST00000517740 490 ntBASIC14.45□□□□□ -0.1
VBP1P61758 AL355075.4-201ENST00000554988 638 ntBASIC14.45□□□□□ -0.1
VBP1P61758 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.45□□□□□ -0.1
VBP1P61758 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 AC124864.1-201ENST00000623408 392 ntBASIC14.45□□□□□ -0.1
VBP1P61758 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VBP1P61758 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms