Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLDN12P56749 FOSL1P1-201ENST00000511041 816 ntBASIC14.04□□□□□ -0.16
CLDN12P56749 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN12P56749 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN12P56749 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLDN12P56749 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN12P56749 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.04□□□□□ -0.16
CLDN12P56749 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN12P56749 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CLDN12P56749 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.04□□□□□ -0.16
CLDN12P56749 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN12P56749 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN12P56749 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN12P56749 AC090616.6-203ENST00000579186 1945 ntBASIC14.03□□□□□ -0.16
CLDN12P56749 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN12P56749 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN12P56749 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 AC026748.1-201ENST00000624349 3251 ntBASIC14.03□□□□□ -0.16
CLDN12P56749 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN12P56749 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 HAUS4P1-201ENST00000406739 1145 ntBASIC14.03□□□□□ -0.16
CLDN12P56749 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN12P56749 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN12P56749 AL049597.2-201ENST00000565575 961 ntBASIC14.03□□□□□ -0.16
CLDN12P56749 AC087388.1-201ENST00000571370 1112 ntBASIC14.03□□□□□ -0.16
CLDN12P56749 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 AC129492.6-201ENST00000611383 1305 ntBASIC14.03□□□□□ -0.16
CLDN12P56749 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CLDN12P56749 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLDN12P56749 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLDN12P56749 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 AC139749.1-202ENST00000617529 3139 ntBASIC14.03□□□□□ -0.16
CLDN12P56749 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN12P56749 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CLDN12P56749 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN12P56749 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDN12P56749 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CLDN12P56749 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
CLDN12P56749 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CLDN12P56749 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.02□□□□□ -0.16
CLDN12P56749 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 AC105250.1-201ENST00000509378 2057 ntBASIC14.02□□□□□ -0.16
CLDN12P56749 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
CLDN12P56749 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CLDN12P56749 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN12P56749 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 AC012569.1-201ENST00000591191 1524 ntBASIC14.02□□□□□ -0.16
CLDN12P56749 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN12P56749 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN12P56749 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.02□□□□□ -0.17
CLDN12P56749 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms