Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
HADHBP55084 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
HADHBP55084 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.77■□□□□ 0.28
HADHBP55084 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.77■□□□□ 0.28
HADHBP55084 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.77■□□□□ 0.28
HADHBP55084 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHBP55084 SPCS2P4-201ENST00000436160 681 ntBASIC16.77■□□□□ 0.28
HADHBP55084 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.77■□□□□ 0.28
HADHBP55084 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.77■□□□□ 0.28
HADHBP55084 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.77■□□□□ 0.28
HADHBP55084 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHBP55084 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHBP55084 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHBP55084 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.77■□□□□ 0.27
HADHBP55084 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.77■□□□□ 0.27
HADHBP55084 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HADHBP55084 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.77■□□□□ 0.27
HADHBP55084 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HADHBP55084 FAM45BP-202ENST00000592932 1624 ntBASIC16.77■□□□□ 0.27
HADHBP55084 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HADHBP55084 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
HADHBP55084 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
HADHBP55084 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HADHBP55084 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.77■□□□□ 0.27
HADHBP55084 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HADHBP55084 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.77■□□□□ 0.27
HADHBP55084 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.77■□□□□ 0.27
HADHBP55084 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HADHBP55084 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.76■□□□□ 0.27
HADHBP55084 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.76■□□□□ 0.27
HADHBP55084 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.76■□□□□ 0.27
HADHBP55084 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.76■□□□□ 0.27
HADHBP55084 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HADHBP55084 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.76■□□□□ 0.27
HADHBP55084 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.76■□□□□ 0.27
HADHBP55084 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.76■□□□□ 0.27
HADHBP55084 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.76■□□□□ 0.27
HADHBP55084 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 HNRNPUP1-201ENST00000554987 333 ntBASIC16.76■□□□□ 0.27
HADHBP55084 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.76■□□□□ 0.27
HADHBP55084 AC026120.1-201ENST00000611536 926 ntBASIC16.76■□□□□ 0.27
HADHBP55084 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HADHBP55084 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.76■□□□□ 0.27
HADHBP55084 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 TCAF2P1-201ENST00000291129 2421 ntBASIC16.76■□□□□ 0.27
HADHBP55084 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHBP55084 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HADHBP55084 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HADHBP55084 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HADHBP55084 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.75■□□□□ 0.27
HADHBP55084 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHBP55084 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.75■□□□□ 0.27
HADHBP55084 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
HADHBP55084 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HADHBP55084 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHBP55084 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHBP55084 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHBP55084 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
HADHBP55084 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHBP55084 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHBP55084 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.75■□□□□ 0.27
HADHBP55084 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HADHBP55084 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHBP55084 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHBP55084 FAM58CP-201ENST00000435741 640 ntBASIC16.75■□□□□ 0.27
HADHBP55084 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HADHBP55084 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms