Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.49■□□□□ 0.23
ATXN3P54252 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.49■□□□□ 0.23
ATXN3P54252 MEIS3P1-201ENST00000495167 958 ntBASIC16.49■□□□□ 0.23
ATXN3P54252 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.49■□□□□ 0.23
ATXN3P54252 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.49■□□□□ 0.23
ATXN3P54252 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ATXN3P54252 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.49■□□□□ 0.23
ATXN3P54252 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.49■□□□□ 0.23
ATXN3P54252 U1.21-201ENST00000580816 167 ntBASIC16.49■□□□□ 0.23
ATXN3P54252 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.49■□□□□ 0.23
ATXN3P54252 AC018529.1-201ENST00000613063 361 ntBASIC16.49■□□□□ 0.23
ATXN3P54252 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATXN3P54252 CU639417.3-201ENST00000624240 1404 ntBASIC16.49■□□□□ 0.23
ATXN3P54252 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.49■□□□□ 0.23
ATXN3P54252 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATXN3P54252 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
ATXN3P54252 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATXN3P54252 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.48■□□□□ 0.23
ATXN3P54252 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.48■□□□□ 0.23
ATXN3P54252 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 AC024909.3-201ENST00000611513 2257 ntBASIC16.48■□□□□ 0.23
ATXN3P54252 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATXN3P54252 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.48■□□□□ 0.23
ATXN3P54252 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATXN3P54252 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.48■□□□□ 0.23
ATXN3P54252 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.48■□□□□ 0.23
ATXN3P54252 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.48■□□□□ 0.23
ATXN3P54252 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.48■□□□□ 0.23
ATXN3P54252 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 AC016027.1-202ENST00000607927 1699 ntBASIC16.48■□□□□ 0.23
ATXN3P54252 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATXN3P54252 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATXN3P54252 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 AC105917.1-201ENST00000506637 2539 ntBASIC16.48■□□□□ 0.23
ATXN3P54252 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.48■□□□□ 0.23
ATXN3P54252 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.47■□□□□ 0.23
ATXN3P54252 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
ATXN3P54252 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ATXN3P54252 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATXN3P54252 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATXN3P54252 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.47■□□□□ 0.23
ATXN3P54252 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.47■□□□□ 0.23
ATXN3P54252 MIR3909-201ENST00000579518 119 ntBASIC16.47■□□□□ 0.23
ATXN3P54252 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.47■□□□□ 0.23
ATXN3P54252 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.47■□□□□ 0.23
ATXN3P54252 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.47■□□□□ 0.23
ATXN3P54252 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.47■□□□□ 0.23
ATXN3P54252 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.47■□□□□ 0.23
ATXN3P54252 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATXN3P54252 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ATXN3P54252 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATXN3P54252 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATXN3P54252 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATXN3P54252 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATXN3P54252 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.46■□□□□ 0.23
ATXN3P54252 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ATXN3P54252 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms