Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.22■□□□□ 0.19
LIMK2P53671 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LIMK2P53671 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LIMK2P53671 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LIMK2P53671 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.21■□□□□ 0.19
LIMK2P53671 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.21■□□□□ 0.19
LIMK2P53671 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LIMK2P53671 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LIMK2P53671 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.21■□□□□ 0.19
LIMK2P53671 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
LIMK2P53671 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LIMK2P53671 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LIMK2P53671 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.21■□□□□ 0.19
LIMK2P53671 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 AC013268.4-201ENST00000637413 2228 ntBASIC16.21■□□□□ 0.19
LIMK2P53671 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.21■□□□□ 0.19
LIMK2P53671 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.21■□□□□ 0.19
LIMK2P53671 AC092474.2-201ENST00000424288 719 ntBASIC16.21■□□□□ 0.19
LIMK2P53671 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.21■□□□□ 0.19
LIMK2P53671 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.21■□□□□ 0.19
LIMK2P53671 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.21■□□□□ 0.19
LIMK2P53671 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.21■□□□□ 0.19
LIMK2P53671 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.21■□□□□ 0.19
LIMK2P53671 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 AC015911.4-201ENST00000588022 1070 ntBASIC16.21■□□□□ 0.19
LIMK2P53671 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.21■□□□□ 0.19
LIMK2P53671 AC092364.2-202ENST00000597012 1073 ntBASIC16.21■□□□□ 0.19
LIMK2P53671 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.21■□□□□ 0.19
LIMK2P53671 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.21■□□□□ 0.19
LIMK2P53671 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LIMK2P53671 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.21■□□□□ 0.19
LIMK2P53671 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.21■□□□□ 0.19
LIMK2P53671 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LIMK2P53671 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIMK2P53671 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LIMK2P53671 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LIMK2P53671 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LIMK2P53671 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LIMK2P53671 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LIMK2P53671 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LIMK2P53671 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.21■□□□□ 0.18
LIMK2P53671 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.21■□□□□ 0.18
LIMK2P53671 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LIMK2P53671 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
LIMK2P53671 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.2■□□□□ 0.18
LIMK2P53671 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 AC144831.1-201ENST00000573312 2656 ntBASIC16.2■□□□□ 0.18
LIMK2P53671 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LIMK2P53671 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.2■□□□□ 0.18
LIMK2P53671 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 FAM8A3P-201ENST00000427218 844 ntBASIC16.2■□□□□ 0.18
LIMK2P53671 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 FAM86GP-201ENST00000448322 971 ntBASIC16.2■□□□□ 0.18
LIMK2P53671 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 SPCS2P1-201ENST00000561636 679 ntBASIC16.2■□□□□ 0.18
LIMK2P53671 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.2■□□□□ 0.18
LIMK2P53671 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.2■□□□□ 0.18
LIMK2P53671 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.2■□□□□ 0.18
LIMK2P53671 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.2■□□□□ 0.18
LIMK2P53671 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.2■□□□□ 0.18
LIMK2P53671 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.2■□□□□ 0.18
LIMK2P53671 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.2■□□□□ 0.18
LIMK2P53671 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.2■□□□□ 0.18
LIMK2P53671 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.2■□□□□ 0.18
LIMK2P53671 AC073439.1-201ENST00000624121 1774 ntBASIC16.2■□□□□ 0.18
LIMK2P53671 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LIMK2P53671 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIMK2P53671 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms