Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PDX1P52945 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.59■□□□□ 0.09
PDX1P52945 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.59■□□□□ 0.09
PDX1P52945 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.59■□□□□ 0.09
PDX1P52945 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.59■□□□□ 0.09
PDX1P52945 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.59■□□□□ 0.09
PDX1P52945 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.59■□□□□ 0.09
PDX1P52945 SRD5A3P1-201ENST00000603021 949 ntBASIC15.59■□□□□ 0.09
PDX1P52945 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PDX1P52945 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.59■□□□□ 0.09
PDX1P52945 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.59■□□□□ 0.09
PDX1P52945 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.59■□□□□ 0.09
PDX1P52945 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PDX1P52945 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PDX1P52945 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.59■□□□□ 0.09
PDX1P52945 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.59■□□□□ 0.09
PDX1P52945 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
PDX1P52945 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.59■□□□□ 0.09
PDX1P52945 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PDX1P52945 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDX1P52945 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDX1P52945 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
PDX1P52945 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDX1P52945 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.58■□□□□ 0.09
PDX1P52945 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.58■□□□□ 0.09
PDX1P52945 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.58■□□□□ 0.09
PDX1P52945 AC018695.7-201ENST00000624587 2492 ntBASIC15.58■□□□□ 0.09
PDX1P52945 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDX1P52945 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.58■□□□□ 0.09
PDX1P52945 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDX1P52945 GPAA1P2-202ENST00000606848 1787 ntBASIC15.58■□□□□ 0.08
PDX1P52945 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.58■□□□□ 0.08
PDX1P52945 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
PDX1P52945 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PDX1P52945 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 AL589987.1-201ENST00000453380 819 ntBASIC15.58■□□□□ 0.08
PDX1P52945 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.58■□□□□ 0.08
PDX1P52945 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDX1P52945 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.58■□□□□ 0.08
PDX1P52945 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.58■□□□□ 0.08
PDX1P52945 AC055876.2-201ENST00000531834 546 ntBASIC15.58■□□□□ 0.08
PDX1P52945 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 AC024267.1-201ENST00000582320 895 ntBASIC15.58■□□□□ 0.08
PDX1P52945 AC004461.2-201ENST00000629517 803 ntBASIC15.58■□□□□ 0.08
PDX1P52945 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDX1P52945 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.58■□□□□ 0.08
PDX1P52945 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.58■□□□□ 0.08
PDX1P52945 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDX1P52945 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.58■□□□□ 0.08
PDX1P52945 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.57■□□□□ 0.08
PDX1P52945 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.57■□□□□ 0.08
PDX1P52945 GGT4P-201ENST00000623672 1708 ntBASIC15.57■□□□□ 0.08
PDX1P52945 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.57■□□□□ 0.08
PDX1P52945 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.57■□□□□ 0.08
PDX1P52945 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms