Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK7P50613 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK7P50613 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.66■□□□□ 0.42
CDK7P50613 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK7P50613 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK7P50613 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK7P50613 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK7P50613 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK7P50613 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK7P50613 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK7P50613 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDK7P50613 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK7P50613 AC007551.1-201ENST00000457394 519 ntBASIC17.65■□□□□ 0.42
CDK7P50613 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK7P50613 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK7P50613 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK7P50613 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK7P50613 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK7P50613 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK7P50613 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK7P50613 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.65■□□□□ 0.42
CDK7P50613 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK7P50613 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDK7P50613 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK7P50613 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK7P50613 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CDK7P50613 KRT8P37-201ENST00000451609 1420 ntBASIC17.64■□□□□ 0.42
CDK7P50613 CICP6-201ENST00000457191 2729 ntBASIC17.64■□□□□ 0.42
CDK7P50613 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDK7P50613 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CDK7P50613 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDK7P50613 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDK7P50613 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK7P50613 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK7P50613 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK7P50613 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDK7P50613 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK7P50613 AC134915.1-201ENST00000426461 574 ntBASIC17.64■□□□□ 0.41
CDK7P50613 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK7P50613 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK7P50613 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.64■□□□□ 0.41
CDK7P50613 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK7P50613 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK7P50613 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK7P50613 AC068587.10-201ENST00000641210 219 ntBASIC17.64■□□□□ 0.41
CDK7P50613 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDK7P50613 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK7P50613 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDK7P50613 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK7P50613 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CDK7P50613 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK7P50613 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK7P50613 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK7P50613 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK7P50613 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms