Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.16■□□□□ 0.02
GABRA4P48169 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.16■□□□□ 0.02
GABRA4P48169 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GABRA4P48169 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GABRA4P48169 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GABRA4P48169 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
GABRA4P48169 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GABRA4P48169 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GABRA4P48169 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GABRA4P48169 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.16■□□□□ 0.02
GABRA4P48169 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 CYP2T1P-202ENST00000641596 2535 ntBASIC15.15■□□□□ 0.02
GABRA4P48169 OR6D1P-203ENST00000641209 4860 ntBASIC15.15■□□□□ 0.02
GABRA4P48169 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 AL391825.1-201ENST00000457671 1364 ntBASIC15.15■□□□□ 0.02
GABRA4P48169 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.15■□□□□ 0.02
GABRA4P48169 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.15■□□□□ 0.02
GABRA4P48169 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.15■□□□□ 0.02
GABRA4P48169 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.15■□□□□ 0.02
GABRA4P48169 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.15■□□□□ 0.02
GABRA4P48169 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.15■□□□□ 0.02
GABRA4P48169 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 TPRX2P-201ENST00000535362 881 ntBASIC15.15■□□□□ 0.02
GABRA4P48169 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
GABRA4P48169 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.15■□□□□ 0.02
GABRA4P48169 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.15■□□□□ 0.02
GABRA4P48169 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.15■□□□□ 0.02
GABRA4P48169 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 AL118508.1-201ENST00000613502 2345 ntBASIC15.15■□□□□ 0.02
GABRA4P48169 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.15■□□□□ 0.02
GABRA4P48169 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABRA4P48169 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GABRA4P48169 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GABRA4P48169 PCDH8P1-201ENST00000428983 2773 ntBASIC15.14■□□□□ 0.01
GABRA4P48169 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GABRA4P48169 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.14■□□□□ 0.01
GABRA4P48169 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
GABRA4P48169 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.14■□□□□ 0.01
GABRA4P48169 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.14■□□□□ 0.01
GABRA4P48169 MEIS3P1-201ENST00000495167 958 ntBASIC15.14■□□□□ 0.01
GABRA4P48169 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.14■□□□□ 0.01
GABRA4P48169 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.14■□□□□ 0.01
GABRA4P48169 AC055876.2-201ENST00000531834 546 ntBASIC15.14■□□□□ 0.01
GABRA4P48169 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
GABRA4P48169 AC005225.4-201ENST00000557330 545 ntBASIC15.14■□□□□ 0.01
GABRA4P48169 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
GABRA4P48169 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 AC140912.1-201ENST00000577171 1054 ntBASIC15.14■□□□□ 0.01
GABRA4P48169 AC099568.2-201ENST00000609194 695 ntBASIC15.14■□□□□ 0.01
GABRA4P48169 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
GABRA4P48169 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.14■□□□□ 0.01
GABRA4P48169 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms