Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA4P43681 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA4P43681 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA4P43681 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA4P43681 CYP4F24P-201ENST00000586049 1580 ntBASIC16.21■□□□□ 0.18
CHRNA4P43681 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CHRNA4P43681 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.21■□□□□ 0.18
CHRNA4P43681 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CHRNA4P43681 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CHRNA4P43681 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.21■□□□□ 0.18
CHRNA4P43681 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.2■□□□□ 0.18
CHRNA4P43681 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA4P43681 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA4P43681 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA4P43681 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA4P43681 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.2■□□□□ 0.18
CHRNA4P43681 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA4P43681 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.2■□□□□ 0.18
CHRNA4P43681 AC109322.1-201ENST00000524499 1264 ntBASIC16.2■□□□□ 0.18
CHRNA4P43681 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA4P43681 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA4P43681 MIR6080-201ENST00000617359 66 ntBASIC16.2■□□□□ 0.18
CHRNA4P43681 AC139530.3-201ENST00000620344 690 ntBASIC16.2■□□□□ 0.18
CHRNA4P43681 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA4P43681 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CHRNA4P43681 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CHRNA4P43681 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA4P43681 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA4P43681 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA4P43681 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA4P43681 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA4P43681 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA4P43681 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CHRNA4P43681 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRNA4P43681 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 CICP13-201ENST00000422015 2789 ntBASIC16.19■□□□□ 0.18
CHRNA4P43681 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA4P43681 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA4P43681 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA4P43681 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 AL139010.1-201ENST00000454878 894 ntBASIC16.19■□□□□ 0.18
CHRNA4P43681 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRNA4P43681 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 AC105021.1-202ENST00000570572 669 ntBASIC16.19■□□□□ 0.18
CHRNA4P43681 MIR4453-201ENST00000584019 89 ntBASIC16.19■□□□□ 0.18
CHRNA4P43681 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA4P43681 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CHRNA4P43681 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA4P43681 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA4P43681 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA4P43681 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA4P43681 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHRNA4P43681 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CHRNA4P43681 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms