Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 AC006058.4-201ENST00000624016 1670 ntBASIC16.82■□□□□ 0.28
SLC1A1P43005 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC1A1P43005 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 BNIP3P1-202ENST00000550043 1585 ntBASIC16.82■□□□□ 0.28
SLC1A1P43005 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC1A1P43005 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC1A1P43005 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SLC1A1P43005 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SLC1A1P43005 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC1A1P43005 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC1A1P43005 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC1A1P43005 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 AC120114.3-201ENST00000611923 658 ntBASIC16.82■□□□□ 0.28
SLC1A1P43005 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC1A1P43005 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC1A1P43005 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC1A1P43005 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC1A1P43005 TSPY26P-202ENST00000565928 3884 ntBASIC16.81■□□□□ 0.28
SLC1A1P43005 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC1A1P43005 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A1P43005 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC1A1P43005 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 MIR346-201ENST00000362234 95 ntBASIC16.81■□□□□ 0.28
SLC1A1P43005 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A1P43005 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC1A1P43005 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 RPS8P6-201ENST00000426177 609 ntBASIC16.81■□□□□ 0.28
SLC1A1P43005 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC1A1P43005 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC1A1P43005 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A1P43005 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A1P43005 AC092902.6-201ENST00000641783 218 ntBASIC16.81■□□□□ 0.28
SLC1A1P43005 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A1P43005 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A1P43005 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A1P43005 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC1A1P43005 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A1P43005 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A1P43005 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A1P43005 AC023157.3-201ENST00000619086 2088 ntBASIC16.81■□□□□ 0.28
SLC1A1P43005 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A1P43005 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A1P43005 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A1P43005 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC1A1P43005 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A1P43005 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SLC1A1P43005 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A1P43005 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC1A1P43005 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC1A1P43005 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A1P43005 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC1A1P43005 FAM58CP-201ENST00000435741 640 ntBASIC16.8■□□□□ 0.28
SLC1A1P43005 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A1P43005 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC1A1P43005 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC1A1P43005 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A1P43005 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC1A1P43005 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC1A1P43005 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A1P43005 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC1A1P43005 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC1A1P43005 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A1P43005 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A1P43005 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A1P43005 REXO1L1P-202ENST00000608646 1974 ntBASIC16.8■□□□□ 0.28
SLC1A1P43005 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms