Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
HNF4AP41235 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.64■□□□□ 0.09
HNF4AP41235 YBX1P5-201ENST00000509441 847 ntBASIC15.64■□□□□ 0.09
HNF4AP41235 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.64■□□□□ 0.09
HNF4AP41235 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.64■□□□□ 0.09
HNF4AP41235 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.64■□□□□ 0.09
HNF4AP41235 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 AC105339.1-204ENST00000636249 355 ntBASIC15.64■□□□□ 0.09
HNF4AP41235 AC134684.3-201ENST00000641758 218 ntBASIC15.64■□□□□ 0.09
HNF4AP41235 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HNF4AP41235 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HNF4AP41235 NORAD-201ENST00000565493 5339 ntBASIC15.64■□□□□ 0.09
HNF4AP41235 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.64■□□□□ 0.09
HNF4AP41235 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.63■□□□□ 0.09
HNF4AP41235 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 AP005117.1-202ENST00000581724 1908 ntBASIC15.63■□□□□ 0.09
HNF4AP41235 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.63■□□□□ 0.09
HNF4AP41235 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.63■□□□□ 0.09
HNF4AP41235 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 AC005237.2-201ENST00000434368 219 ntBASIC15.63■□□□□ 0.09
HNF4AP41235 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.63■□□□□ 0.09
HNF4AP41235 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.63■□□□□ 0.09
HNF4AP41235 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.63■□□□□ 0.09
HNF4AP41235 AC022145.2-201ENST00000598203 171 ntBASIC15.63■□□□□ 0.09
HNF4AP41235 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.63■□□□□ 0.09
HNF4AP41235 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.63■□□□□ 0.09
HNF4AP41235 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 AP001282.1-201ENST00000531301 1499 ntBASIC15.63■□□□□ 0.09
HNF4AP41235 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
HNF4AP41235 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.63■□□□□ 0.09
HNF4AP41235 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.63■□□□□ 0.09
HNF4AP41235 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HNF4AP41235 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.63■□□□□ 0.09
HNF4AP41235 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.63■□□□□ 0.09
HNF4AP41235 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.63■□□□□ 0.09
HNF4AP41235 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HNF4AP41235 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.62■□□□□ 0.09
HNF4AP41235 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.62■□□□□ 0.09
HNF4AP41235 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.62■□□□□ 0.09
HNF4AP41235 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HNF4AP41235 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HNF4AP41235 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.62■□□□□ 0.09
HNF4AP41235 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.62■□□□□ 0.09
HNF4AP41235 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.62■□□□□ 0.09
HNF4AP41235 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.62■□□□□ 0.09
HNF4AP41235 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.62■□□□□ 0.09
HNF4AP41235 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.62■□□□□ 0.09
HNF4AP41235 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HNF4AP41235 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HNF4AP41235 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.62■□□□□ 0.09
HNF4AP41235 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms