Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 MIR326-201ENST00000362220 95 ntBASIC20.26■□□□□ 0.83
ATP6V1AP38606 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 AC006033.1-201ENST00000440505 426 ntBASIC20.26■□□□□ 0.83
ATP6V1AP38606 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 AC022137.2-201ENST00000503482 481 ntBASIC20.26■□□□□ 0.83
ATP6V1AP38606 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 HNRNPUP1-201ENST00000554987 333 ntBASIC20.26■□□□□ 0.83
ATP6V1AP38606 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 AC000095.1-201ENST00000603208 874 ntBASIC20.26■□□□□ 0.83
ATP6V1AP38606 AL450472.2-201ENST00000603663 1156 ntBASIC20.26■□□□□ 0.83
ATP6V1AP38606 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6V1AP38606 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V1AP38606 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 CNN2P8-201ENST00000421872 913 ntBASIC20.25■□□□□ 0.83
ATP6V1AP38606 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 KRT8P13-201ENST00000463294 1010 ntBASIC20.25■□□□□ 0.83
ATP6V1AP38606 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.25■□□□□ 0.83
ATP6V1AP38606 AL121723.1-201ENST00000445194 1519 ntBASIC20.25■□□□□ 0.83
ATP6V1AP38606 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ATP6V1AP38606 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V1AP38606 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 ACKR1-201ENST00000368121 1240 ntBASIC20.24■□□□□ 0.83
ATP6V1AP38606 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 FAM86HP-204ENST00000513466 959 ntBASIC20.24■□□□□ 0.83
ATP6V1AP38606 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms