Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX11P35716 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX11P35716 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX11P35716 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.81■□□□□ 0.12
SOX11P35716 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX11P35716 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX11P35716 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX11P35716 SLC25A6P2-201ENST00000497974 877 ntBASIC15.81■□□□□ 0.12
SOX11P35716 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.81■□□□□ 0.12
SOX11P35716 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SOX11P35716 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SOX11P35716 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.81■□□□□ 0.12
SOX11P35716 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
SOX11P35716 AL596442.2-201ENST00000610240 980 ntBASIC15.81■□□□□ 0.12
SOX11P35716 ACTL9-202ENST00000612068 1252 ntBASIC15.81■□□□□ 0.12
SOX11P35716 AL136379.1-201ENST00000623471 2642 ntBASIC15.81■□□□□ 0.12
SOX11P35716 GGT4P-201ENST00000623672 1708 ntBASIC15.81■□□□□ 0.12
SOX11P35716 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX11P35716 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SOX11P35716 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SOX11P35716 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX11P35716 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.81■□□□□ 0.12
SOX11P35716 AC006449.6-201ENST00000612330 2296 ntBASIC15.8■□□□□ 0.12
SOX11P35716 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SOX11P35716 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX11P35716 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.8■□□□□ 0.12
SOX11P35716 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SOX11P35716 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SOX11P35716 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.8■□□□□ 0.12
SOX11P35716 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX11P35716 CEND1P1-201ENST00000451006 455 ntBASIC15.8■□□□□ 0.12
SOX11P35716 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SOX11P35716 AC087163.2-201ENST00000457299 853 ntBASIC15.8■□□□□ 0.12
SOX11P35716 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.8■□□□□ 0.12
SOX11P35716 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.8■□□□□ 0.12
SOX11P35716 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.8■□□□□ 0.12
SOX11P35716 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.8■□□□□ 0.12
SOX11P35716 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SOX11P35716 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX11P35716 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.8■□□□□ 0.12
SOX11P35716 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SOX11P35716 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX11P35716 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX11P35716 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX11P35716 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX11P35716 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX11P35716 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SOX11P35716 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX11P35716 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX11P35716 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX11P35716 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX11P35716 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX11P35716 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.79■□□□□ 0.12
SOX11P35716 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SOX11P35716 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX11P35716 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SOX11P35716 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX11P35716 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX11P35716 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX11P35716 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.79■□□□□ 0.12
SOX11P35716 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms