Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CD40P25942 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CD40P25942 AL391825.1-201ENST00000457671 1364 ntBASIC13.82□□□□□ -0.2
CD40P25942 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.81□□□□□ -0.2
CD40P25942 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD40P25942 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CD40P25942 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40P25942 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
CD40P25942 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD40P25942 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.81□□□□□ -0.2
CD40P25942 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40P25942 AC087499.6-201ENST00000411576 835 ntBASIC13.81□□□□□ -0.2
CD40P25942 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.81□□□□□ -0.2
CD40P25942 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40P25942 AP005018.1-201ENST00000525475 301 ntBASIC13.81□□□□□ -0.2
CD40P25942 API5-211ENST00000534695 560 ntTSL 5 BASIC13.81□□□□□ -0.2
CD40P25942 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.81□□□□□ -0.2
CD40P25942 TIMM17BP1-201ENST00000545713 516 ntBASIC13.81□□□□□ -0.2
CD40P25942 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40P25942 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40P25942 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.81□□□□□ -0.2
CD40P25942 AC012645.4-201ENST00000610691 1061 ntBASIC13.81□□□□□ -0.2
CD40P25942 AC004790.1-201ENST00000612686 536 ntBASIC13.81□□□□□ -0.2
CD40P25942 AC025048.6-201ENST00000634326 1161 ntBASIC13.81□□□□□ -0.2
CD40P25942 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD40P25942 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40P25942 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.81□□□□□ -0.2
CD40P25942 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CD40P25942 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD40P25942 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40P25942 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
CD40P25942 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40P25942 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 AC134407.2-201ENST00000625089 1978 ntBASIC13.8□□□□□ -0.2
CD40P25942 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.8□□□□□ -0.2
CD40P25942 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40P25942 MIR648-201ENST00000385046 94 ntBASIC13.8□□□□□ -0.2
CD40P25942 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 MEP1AP4-201ENST00000423244 1087 ntBASIC13.8□□□□□ -0.2
CD40P25942 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.8□□□□□ -0.2
CD40P25942 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 TPRX2P-201ENST00000535362 881 ntBASIC13.8□□□□□ -0.2
CD40P25942 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.8□□□□□ -0.2
CD40P25942 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.8□□□□□ -0.2
CD40P25942 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 TP53TG3HP-202ENST00000569755 579 ntBASIC13.8□□□□□ -0.2
CD40P25942 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40P25942 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms