Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.63■□□□□ 0.73
ITGA6P23229 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.63■□□□□ 0.73
ITGA6P23229 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ITGA6P23229 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.63■□□□□ 0.73
ITGA6P23229 FAM86LP-201ENST00000478302 853 ntBASIC19.63■□□□□ 0.73
ITGA6P23229 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.63■□□□□ 0.73
ITGA6P23229 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.63■□□□□ 0.73
ITGA6P23229 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.63■□□□□ 0.73
ITGA6P23229 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.63■□□□□ 0.73
ITGA6P23229 RPSAP52-203ENST00000622976 1023 ntBASIC19.63■□□□□ 0.73
ITGA6P23229 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ITGA6P23229 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.63■□□□□ 0.73
ITGA6P23229 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ITGA6P23229 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITGA6P23229 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 PCDH8P1-201ENST00000428983 2773 ntBASIC19.62■□□□□ 0.73
ITGA6P23229 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ITGA6P23229 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ITGA6P23229 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ITGA6P23229 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ITGA6P23229 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 AL442647.2-201ENST00000429864 857 ntBASIC19.62■□□□□ 0.73
ITGA6P23229 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.62■□□□□ 0.73
ITGA6P23229 ACA64.2-201ENST00000459014 129 ntBASIC19.62■□□□□ 0.73
ITGA6P23229 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.62■□□□□ 0.73
ITGA6P23229 KRT17P8-201ENST00000540749 863 ntBASIC19.62■□□□□ 0.73
ITGA6P23229 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.62■□□□□ 0.73
ITGA6P23229 AC106886.1-201ENST00000568660 600 ntBASIC19.62■□□□□ 0.73
ITGA6P23229 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.62■□□□□ 0.73
ITGA6P23229 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.62■□□□□ 0.73
ITGA6P23229 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.62■□□□□ 0.73
ITGA6P23229 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.62■□□□□ 0.73
ITGA6P23229 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA6P23229 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ITGA6P23229 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA6P23229 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA6P23229 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA6P23229 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA6P23229 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA6P23229 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA6P23229 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ITGA6P23229 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.61■□□□□ 0.73
ITGA6P23229 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.61■□□□□ 0.73
ITGA6P23229 AC007274.1-201ENST00000439805 662 ntBASIC19.61■□□□□ 0.73
ITGA6P23229 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 AC007389.4-201ENST00000454674 793 ntBASIC19.61■□□□□ 0.73
ITGA6P23229 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.61■□□□□ 0.73
ITGA6P23229 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.61■□□□□ 0.73
ITGA6P23229 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.61■□□□□ 0.73
ITGA6P23229 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ITGA6P23229 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ITGA6P23229 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ITGA6P23229 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA6P23229 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ITGA6P23229 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.61■□□□□ 0.73
ITGA6P23229 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms