Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.27□□□□□ -0.13
CTLA4P16410 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.27□□□□□ -0.13
CTLA4P16410 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CTLA4P16410 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.27□□□□□ -0.13
CTLA4P16410 TIMM8BP1-201ENST00000452384 211 ntBASIC14.27□□□□□ -0.13
CTLA4P16410 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.27□□□□□ -0.13
CTLA4P16410 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.27□□□□□ -0.13
CTLA4P16410 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CTLA4P16410 ALG1L5P-201ENST00000482043 771 ntBASIC14.27□□□□□ -0.13
CTLA4P16410 RNA5SP410-201ENST00000516285 106 ntBASIC14.27□□□□□ -0.13
CTLA4P16410 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.27□□□□□ -0.13
CTLA4P16410 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.27□□□□□ -0.13
CTLA4P16410 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.27□□□□□ -0.13
CTLA4P16410 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.27□□□□□ -0.13
CTLA4P16410 LINC01225-203ENST00000563550 1244 ntBASIC14.27□□□□□ -0.13
CTLA4P16410 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
CTLA4P16410 AL671883.3-201ENST00000603274 991 ntBASIC14.27□□□□□ -0.13
CTLA4P16410 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.27□□□□□ -0.13
CTLA4P16410 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.27□□□□□ -0.13
CTLA4P16410 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.27□□□□□ -0.13
CTLA4P16410 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTLA4P16410 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.27□□□□□ -0.13
CTLA4P16410 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CTLA4P16410 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CTLA4P16410 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.26□□□□□ -0.13
CTLA4P16410 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 PPT1-215ENST00000641471 2368 ntBASIC14.26□□□□□ -0.13
CTLA4P16410 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CTLA4P16410 AC013268.4-201ENST00000637413 2228 ntBASIC14.26□□□□□ -0.13
CTLA4P16410 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.26□□□□□ -0.13
CTLA4P16410 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 AL691432.1-201ENST00000596308 1422 ntBASIC14.26□□□□□ -0.13
CTLA4P16410 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CTLA4P16410 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 AL596257.1-201ENST00000641463 2694 ntBASIC14.26□□□□□ -0.13
CTLA4P16410 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CTLA4P16410 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.26□□□□□ -0.13
CTLA4P16410 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 FAM220BP-201ENST00000377689 816 ntBASIC14.26□□□□□ -0.13
CTLA4P16410 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.26□□□□□ -0.13
CTLA4P16410 ACTG1P14-201ENST00000446382 1122 ntBASIC14.26□□□□□ -0.13
CTLA4P16410 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CTLA4P16410 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.26□□□□□ -0.13
CTLA4P16410 AC243562.2-201ENST00000561247 970 ntBASIC14.26□□□□□ -0.13
CTLA4P16410 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.26□□□□□ -0.13
CTLA4P16410 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.26□□□□□ -0.13
CTLA4P16410 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.26□□□□□ -0.13
CTLA4P16410 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CTLA4P16410 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
CTLA4P16410 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CTLA4P16410 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 DBET-201ENST00000630918 3363 ntBASIC14.26□□□□□ -0.13
CTLA4P16410 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.26□□□□□ -0.13
CTLA4P16410 BNIP3P1-202ENST00000550043 1585 ntBASIC14.26□□□□□ -0.13
CTLA4P16410 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTLA4P16410 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CTLA4P16410 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.25□□□□□ -0.13
CTLA4P16410 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.25□□□□□ -0.13
CTLA4P16410 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 AC018892.3-201ENST00000623986 2499 ntBASIC14.25□□□□□ -0.13
CTLA4P16410 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms