Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCL4P13236 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CCL4P13236 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
CCL4P13236 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CCL4P13236 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCL4P13236 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.05■□□□□ 0
CCL4P13236 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.05■□□□□ 0
CCL4P13236 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.05■□□□□ -0
CCL4P13236 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.05■□□□□ -0
CCL4P13236 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCL4P13236 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.05■□□□□ -0
CCL4P13236 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.05■□□□□ -0
CCL4P13236 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
CCL4P13236 KLF2P4-201ENST00000451959 1225 ntBASIC15.05■□□□□ -0
CCL4P13236 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.05■□□□□ -0
CCL4P13236 SLED1-202ENST00000512051 380 ntBASIC15.05■□□□□ -0
CCL4P13236 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCL4P13236 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.05■□□□□ -0
CCL4P13236 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.05■□□□□ -0
CCL4P13236 AL022328.1-201ENST00000610050 478 ntBASIC15.05■□□□□ -0
CCL4P13236 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.05■□□□□ -0
CCL4P13236 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.05■□□□□ -0
CCL4P13236 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCL4P13236 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.05■□□□□ -0
CCL4P13236 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.05■□□□□ -0
CCL4P13236 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.05■□□□□ -0
CCL4P13236 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.05■□□□□ -0
CCL4P13236 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
CCL4P13236 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.05■□□□□ -0
CCL4P13236 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.05■□□□□ -0
CCL4P13236 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.05■□□□□ -0
CCL4P13236 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL4P13236 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 AC011676.5-201ENST00000624864 2660 ntBASIC15.04■□□□□ -0
CCL4P13236 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.04■□□□□ -0
CCL4P13236 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.04■□□□□ -0
CCL4P13236 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCL4P13236 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.04■□□□□ -0
CCL4P13236 INTS4P2-202ENST00000614726 2019 ntBASIC15.04■□□□□ -0
CCL4P13236 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.04■□□□□ -0
CCL4P13236 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CCL4P13236 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 AP001282.1-201ENST00000531301 1499 ntBASIC15.04■□□□□ -0
CCL4P13236 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.04■□□□□ -0
CCL4P13236 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 HAUS4P1-201ENST00000406739 1145 ntBASIC15.04■□□□□ -0
CCL4P13236 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.04■□□□□ -0
CCL4P13236 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.04■□□□□ -0
CCL4P13236 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.04■□□□□ -0
CCL4P13236 AC124283.3-201ENST00000570869 594 ntBASIC15.04■□□□□ -0
CCL4P13236 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.04■□□□□ -0
CCL4P13236 AL450472.2-201ENST00000603663 1156 ntBASIC15.04■□□□□ -0
CCL4P13236 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.04■□□□□ -0
CCL4P13236 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
CCL4P13236 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.04■□□□□ -0
CCL4P13236 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.04■□□□□ -0
CCL4P13236 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CCL4P13236 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CCL4P13236 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL4P13236 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCL4P13236 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CCL4P13236 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.04■□□□□ -0
CCL4P13236 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
CCL4P13236 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms