Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A1P11836 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MS4A1P11836 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A1P11836 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A1P11836 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A1P11836 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MS4A1P11836 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.65■□□□□ 0.9
MS4A1P11836 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.65■□□□□ 0.9
MS4A1P11836 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
MS4A1P11836 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC20.65■□□□□ 0.9
MS4A1P11836 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MS4A1P11836 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.65■□□□□ 0.9
MS4A1P11836 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.65■□□□□ 0.9
MS4A1P11836 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.65■□□□□ 0.9
MS4A1P11836 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MS4A1P11836 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.65■□□□□ 0.9
MS4A1P11836 MIR940-201ENST00000401276 94 ntBASIC20.65■□□□□ 0.9
MS4A1P11836 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.65■□□□□ 0.9
MS4A1P11836 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.65■□□□□ 0.9
MS4A1P11836 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.65■□□□□ 0.9
MS4A1P11836 PGAM5P1-201ENST00000518923 814 ntBASIC20.65■□□□□ 0.9
MS4A1P11836 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.65■□□□□ 0.9
MS4A1P11836 KRT8P23-201ENST00000560090 1207 ntBASIC20.65■□□□□ 0.9
MS4A1P11836 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.65■□□□□ 0.9
MS4A1P11836 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.65■□□□□ 0.9
MS4A1P11836 AC026120.1-201ENST00000611536 926 ntBASIC20.65■□□□□ 0.9
MS4A1P11836 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MS4A1P11836 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC20.65■□□□□ 0.9
MS4A1P11836 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A1P11836 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.65■□□□□ 0.9
MS4A1P11836 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
MS4A1P11836 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
MS4A1P11836 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.64■□□□□ 0.9
MS4A1P11836 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A1P11836 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A1P11836 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A1P11836 AC006486.2-201ENST00000624246 2199 ntBASIC20.64■□□□□ 0.89
MS4A1P11836 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A1P11836 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
MS4A1P11836 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.64■□□□□ 0.89
MS4A1P11836 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.64■□□□□ 0.89
MS4A1P11836 ADH5P3-201ENST00000433842 1137 ntBASIC20.64■□□□□ 0.89
MS4A1P11836 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MS4A1P11836 SPDYE11-202ENST00000450699 704 ntBASIC20.64■□□□□ 0.89
MS4A1P11836 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MS4A1P11836 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.64■□□□□ 0.89
MS4A1P11836 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.64■□□□□ 0.89
MS4A1P11836 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.64■□□□□ 0.89
MS4A1P11836 SPDYE9P-201ENST00000570642 692 ntBASIC20.64■□□□□ 0.89
MS4A1P11836 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.64■□□□□ 0.89
MS4A1P11836 SPDYE10P-202ENST00000612005 668 ntBASIC20.64■□□□□ 0.89
MS4A1P11836 SPDYE8P-202ENST00000612377 668 ntBASIC20.64■□□□□ 0.89
MS4A1P11836 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A1P11836 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MS4A1P11836 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A1P11836 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MS4A1P11836 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
MS4A1P11836 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.64■□□□□ 0.89
MS4A1P11836 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC20.64■□□□□ 0.89
MS4A1P11836 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC20.64■□□□□ 0.89
MS4A1P11836 SSR4P1-203ENST00000599569 2260 ntBASIC20.64■□□□□ 0.89
MS4A1P11836 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MS4A1P11836 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.63■□□□□ 0.89
MS4A1P11836 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
MS4A1P11836 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
MS4A1P11836 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
MS4A1P11836 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
MS4A1P11836 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC20.63■□□□□ 0.89
MS4A1P11836 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 AL022342.1-201ENST00000400363 863 ntBASIC20.63■□□□□ 0.89
MS4A1P11836 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.63■□□□□ 0.89
MS4A1P11836 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.63■□□□□ 0.89
MS4A1P11836 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.63■□□□□ 0.89
MS4A1P11836 AC061975.2-201ENST00000581722 295 ntBASIC20.63■□□□□ 0.89
MS4A1P11836 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.63■□□□□ 0.89
MS4A1P11836 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.63■□□□□ 0.89
MS4A1P11836 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms