Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PTPRFP10586 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTPRFP10586 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPRFP10586 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPRFP10586 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPRFP10586 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTPRFP10586 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PTPRFP10586 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPRFP10586 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPRFP10586 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.06■□□□□ 0.48
PTPRFP10586 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
PTPRFP10586 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTPRFP10586 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
PTPRFP10586 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTPRFP10586 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTPRFP10586 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPRFP10586 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPRFP10586 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 AL096828.3-201ENST00000615354 462 ntBASIC18.06■□□□□ 0.48
PTPRFP10586 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPRFP10586 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPRFP10586 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPRFP10586 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTPRFP10586 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PTPRFP10586 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPRFP10586 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPRFP10586 FAM197Y7-201ENST00000432892 766 ntBASIC18.05■□□□□ 0.48
PTPRFP10586 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.05■□□□□ 0.48
PTPRFP10586 AL591846.1-201ENST00000451736 433 ntBASIC18.05■□□□□ 0.48
PTPRFP10586 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPRFP10586 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPRFP10586 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPRFP10586 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTPRFP10586 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPRFP10586 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PTPRFP10586 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPRFP10586 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPRFP10586 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPRFP10586 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.04■□□□□ 0.48
PTPRFP10586 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPRFP10586 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PTPRFP10586 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPRFP10586 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPRFP10586 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 BTBD6P1-201ENST00000412176 1267 ntBASIC18.04■□□□□ 0.48
PTPRFP10586 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPRFP10586 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.04■□□□□ 0.48
PTPRFP10586 Z93015.1-201ENST00000451718 390 ntBASIC18.04■□□□□ 0.48
PTPRFP10586 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
PTPRFP10586 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTPRFP10586 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPRFP10586 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPRFP10586 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PTPRFP10586 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPRFP10586 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPRFP10586 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPRFP10586 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPRFP10586 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPRFP10586 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPRFP10586 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPRFP10586 SCARNA20.5-201ENST00000516991 142 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms