Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC9.77□□□□□ -0.85
APOBP04114 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 MIR1227-201ENST00000408484 88 ntBASIC9.77□□□□□ -0.85
APOBP04114 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 RN7SL8P-201ENST00000461771 266 ntBASIC9.77□□□□□ -0.85
APOBP04114 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC9.77□□□□□ -0.85
APOBP04114 AC244157.2-201ENST00000616239 1006 ntBASIC9.77□□□□□ -0.85
APOBP04114 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC9.77□□□□□ -0.85
APOBP04114 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC9.77□□□□□ -0.85
APOBP04114 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC9.77□□□□□ -0.85
APOBP04114 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC9.77□□□□□ -0.85
APOBP04114 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 TISP43-201ENST00000409793 538 ntTSL 4 BASIC9.77□□□□□ -0.85
APOBP04114 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC9.77□□□□□ -0.85
APOBP04114 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC9.77□□□□□ -0.85
APOBP04114 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC9.77□□□□□ -0.85
APOBP04114 AC132192.2-201ENST00000596206 1147 ntBASIC9.77□□□□□ -0.85
APOBP04114 AL136301.1-201ENST00000615830 422 ntBASIC9.77□□□□□ -0.85
APOBP04114 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.85
APOBP04114 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
APOBP04114 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
APOBP04114 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
APOBP04114 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC9.77□□□□□ -0.85
APOBP04114 AL391280.1-201ENST00000506969 1062 ntBASIC9.77□□□□□ -0.85
APOBP04114 IGLV3-15-201ENST00000518356 244 ntBASIC9.77□□□□□ -0.85
APOBP04114 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
APOBP04114 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC9.77□□□□□ -0.85
APOBP04114 GMFG-209ENST00000600322 622 ntTSL 5 BASIC9.77□□□□□ -0.85
APOBP04114 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC9.77□□□□□ -0.85
APOBP04114 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC9.76□□□□□ -0.85
APOBP04114 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 AMT-233ENST00000636522 1620 ntTSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 TK1-203ENST00000588734 1681 ntTSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 PDIA3P2-201ENST00000428073 158 ntBASIC9.76□□□□□ -0.85
APOBP04114 EEF1DP6-201ENST00000449232 372 ntBASIC9.76□□□□□ -0.85
APOBP04114 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 AP002490.2-201ENST00000524791 560 ntBASIC9.76□□□□□ -0.85
APOBP04114 AC243562.2-201ENST00000561247 970 ntBASIC9.76□□□□□ -0.85
APOBP04114 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC9.76□□□□□ -0.85
APOBP04114 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 Z97180.1-201ENST00000445173 988 ntBASIC9.76□□□□□ -0.85
APOBP04114 OARD1-204ENST00000464633 717 ntTSL 2 BASIC9.76□□□□□ -0.85
APOBP04114 ATP6V0CP2-201ENST00000469409 207 ntBASIC9.76□□□□□ -0.85
APOBP04114 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC9.76□□□□□ -0.85
APOBP04114 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC9.76□□□□□ -0.85
APOBP04114 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 BX539320.1-201ENST00000623759 877 ntBASIC9.76□□□□□ -0.85
APOBP04114 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 AC141586.5-201ENST00000624546 2050 ntBASIC9.76□□□□□ -0.85
APOBP04114 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
APOBP04114 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
APOBP04114 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms