Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MT-ND3P03897 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.45■□□□□ 0.22
MT-ND3P03897 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.45■□□□□ 0.22
MT-ND3P03897 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.45■□□□□ 0.22
MT-ND3P03897 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.45■□□□□ 0.22
MT-ND3P03897 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.45■□□□□ 0.22
MT-ND3P03897 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
MT-ND3P03897 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MT-ND3P03897 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MT-ND3P03897 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-ND3P03897 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.44■□□□□ 0.22
MT-ND3P03897 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.44■□□□□ 0.22
MT-ND3P03897 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 AP001160.2-201ENST00000596071 487 ntBASIC16.44■□□□□ 0.22
MT-ND3P03897 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.44■□□□□ 0.22
MT-ND3P03897 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-ND3P03897 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-ND3P03897 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MT-ND3P03897 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MT-ND3P03897 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND3P03897 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.44■□□□□ 0.22
MT-ND3P03897 AC129492.6-201ENST00000611383 1305 ntBASIC16.44■□□□□ 0.22
MT-ND3P03897 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MT-ND3P03897 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
MT-ND3P03897 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MT-ND3P03897 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND3P03897 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-ND3P03897 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-ND3P03897 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
MT-ND3P03897 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.43■□□□□ 0.22
MT-ND3P03897 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MT-ND3P03897 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MT-ND3P03897 AC211486.1-202ENST00000416371 468 ntBASIC16.43■□□□□ 0.22
MT-ND3P03897 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND3P03897 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND3P03897 AC211476.1-201ENST00000503899 468 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms