Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND1P03886 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND1P03886 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND1P03886 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND1P03886 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND1P03886 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 FAM45BP-202ENST00000592932 1624 ntBASIC15.22■□□□□ 0.03
MT-ND1P03886 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MT-ND1P03886 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND1P03886 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND1P03886 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND1P03886 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND1P03886 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.22■□□□□ 0.03
MT-ND1P03886 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND1P03886 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND1P03886 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 AP001350.2-201ENST00000625104 1094 ntBASIC15.22■□□□□ 0.03
MT-ND1P03886 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND1P03886 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND1P03886 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND1P03886 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND1P03886 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND1P03886 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND1P03886 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND1P03886 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND1P03886 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MT-ND1P03886 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-ND1P03886 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
MT-ND1P03886 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND1P03886 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MT-ND1P03886 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND1P03886 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND1P03886 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
MT-ND1P03886 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
MT-ND1P03886 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
MT-ND1P03886 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND1P03886 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.21■□□□□ 0.03
MT-ND1P03886 GGTLC5P-201ENST00000617623 998 ntBASIC15.21■□□□□ 0.03
MT-ND1P03886 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND1P03886 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-ND1P03886 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND1P03886 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND1P03886 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms