Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.15■□□□□ 0.18
RFPL1O75677 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RFPL1O75677 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RFPL1O75677 AC245100.5-201ENST00000452108 331 ntBASIC16.15■□□□□ 0.18
RFPL1O75677 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RFPL1O75677 PDPK2P-202ENST00000562415 1191 ntBASIC16.15■□□□□ 0.18
RFPL1O75677 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RFPL1O75677 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
RFPL1O75677 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.15■□□□□ 0.18
RFPL1O75677 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RFPL1O75677 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.15■□□□□ 0.18
RFPL1O75677 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 AC105250.1-201ENST00000509378 2057 ntBASIC16.15■□□□□ 0.18
RFPL1O75677 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.15■□□□□ 0.18
RFPL1O75677 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RFPL1O75677 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
RFPL1O75677 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.14■□□□□ 0.17
RFPL1O75677 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RFPL1O75677 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.14■□□□□ 0.17
RFPL1O75677 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL1O75677 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.14■□□□□ 0.17
RFPL1O75677 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.14■□□□□ 0.17
RFPL1O75677 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.14■□□□□ 0.17
RFPL1O75677 AL513480.1-201ENST00000451731 511 ntBASIC16.14■□□□□ 0.17
RFPL1O75677 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.14■□□□□ 0.17
RFPL1O75677 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.14■□□□□ 0.17
RFPL1O75677 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.14■□□□□ 0.17
RFPL1O75677 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.14■□□□□ 0.17
RFPL1O75677 AC010507.1-201ENST00000633895 436 ntBASIC16.14■□□□□ 0.17
RFPL1O75677 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL1O75677 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL1O75677 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFPL1O75677 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 AP002414.2-201ENST00000591780 3365 ntBASIC16.14■□□□□ 0.17
RFPL1O75677 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 BCAR1-209ENST00000546196 1340 ntBASIC16.14■□□□□ 0.17
RFPL1O75677 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL1O75677 AC087481.3-201ENST00000602886 1894 ntBASIC16.14■□□□□ 0.17
RFPL1O75677 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL1O75677 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL1O75677 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFPL1O75677 AC090616.6-203ENST00000579186 1945 ntBASIC16.13■□□□□ 0.17
RFPL1O75677 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.13■□□□□ 0.17
RFPL1O75677 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFPL1O75677 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RFPL1O75677 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.13■□□□□ 0.17
RFPL1O75677 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.13■□□□□ 0.17
RFPL1O75677 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 IGLL3P-201ENST00000412472 434 ntBASIC16.13■□□□□ 0.17
RFPL1O75677 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.13■□□□□ 0.17
RFPL1O75677 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.13■□□□□ 0.17
RFPL1O75677 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.13■□□□□ 0.17
RFPL1O75677 AC096734.2-201ENST00000562054 433 ntBASIC16.13■□□□□ 0.17
RFPL1O75677 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RFPL1O75677 AC106028.4-201ENST00000614509 607 ntBASIC16.13■□□□□ 0.17
RFPL1O75677 AC004877.2-201ENST00000623941 599 ntBASIC16.13■□□□□ 0.17
RFPL1O75677 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.13■□□□□ 0.17
RFPL1O75677 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.13■□□□□ 0.17
RFPL1O75677 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms