Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.69■□□□□ 0.26
LRCH4O75427 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.69■□□□□ 0.26
LRCH4O75427 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.69■□□□□ 0.26
LRCH4O75427 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRCH4O75427 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LRCH4O75427 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LRCH4O75427 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.69■□□□□ 0.26
LRCH4O75427 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.69■□□□□ 0.26
LRCH4O75427 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.69■□□□□ 0.26
LRCH4O75427 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.69■□□□□ 0.26
LRCH4O75427 AC020658.6-201ENST00000623564 1870 ntBASIC16.69■□□□□ 0.26
LRCH4O75427 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 KRT8P37-201ENST00000451609 1420 ntBASIC16.69■□□□□ 0.26
LRCH4O75427 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.69■□□□□ 0.26
LRCH4O75427 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH4O75427 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LRCH4O75427 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRCH4O75427 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.68■□□□□ 0.26
LRCH4O75427 AC092127.1-201ENST00000567093 3455 ntBASIC16.68■□□□□ 0.26
LRCH4O75427 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.68■□□□□ 0.26
LRCH4O75427 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LRCH4O75427 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LRCH4O75427 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LRCH4O75427 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
LRCH4O75427 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LRCH4O75427 AC254562.1-201ENST00000417586 456 ntBASIC16.68■□□□□ 0.26
LRCH4O75427 AL353705.2-201ENST00000428243 662 ntBASIC16.68■□□□□ 0.26
LRCH4O75427 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.68■□□□□ 0.26
LRCH4O75427 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.68■□□□□ 0.26
LRCH4O75427 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.68■□□□□ 0.26
LRCH4O75427 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.68■□□□□ 0.26
LRCH4O75427 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.68■□□□□ 0.26
LRCH4O75427 MIR4313-201ENST00000580760 101 ntBASIC16.68■□□□□ 0.26
LRCH4O75427 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.68■□□□□ 0.26
LRCH4O75427 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.68■□□□□ 0.26
LRCH4O75427 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.68■□□□□ 0.26
LRCH4O75427 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.68■□□□□ 0.26
LRCH4O75427 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 AC134684.3-201ENST00000641758 218 ntBASIC16.68■□□□□ 0.26
LRCH4O75427 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.68■□□□□ 0.26
LRCH4O75427 AC073347.1-201ENST00000421633 2643 ntBASIC16.68■□□□□ 0.26
LRCH4O75427 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
LRCH4O75427 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LRCH4O75427 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LRCH4O75427 HYMAI-201ENST00000635591 3347 ntBASIC16.68■□□□□ 0.26
LRCH4O75427 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRCH4O75427 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.67■□□□□ 0.26
LRCH4O75427 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 SSR4P1-203ENST00000599569 2260 ntBASIC16.67■□□□□ 0.26
LRCH4O75427 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.67■□□□□ 0.26
LRCH4O75427 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.67■□□□□ 0.26
LRCH4O75427 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.67■□□□□ 0.26
LRCH4O75427 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRCH4O75427 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.67■□□□□ 0.26
LRCH4O75427 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.67■□□□□ 0.26
LRCH4O75427 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.67■□□□□ 0.26
LRCH4O75427 AC105021.1-202ENST00000570572 669 ntBASIC16.67■□□□□ 0.26
LRCH4O75427 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.67■□□□□ 0.26
LRCH4O75427 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.67■□□□□ 0.26
LRCH4O75427 AC126177.1-201ENST00000547829 2218 ntBASIC16.67■□□□□ 0.26
LRCH4O75427 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.67■□□□□ 0.26
LRCH4O75427 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRCH4O75427 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LRCH4O75427 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRCH4O75427 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.67■□□□□ 0.26
LRCH4O75427 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms