Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 REXO1L6P-201ENST00000603433 1515 ntBASIC18.65■□□□□ 0.58
CTNND1O60716 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.65■□□□□ 0.58
CTNND1O60716 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 BNIP3P42-201ENST00000454982 569 ntBASIC18.65■□□□□ 0.58
CTNND1O60716 PHKG1P2-201ENST00000457537 863 ntBASIC18.65■□□□□ 0.58
CTNND1O60716 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CTNND1O60716 TDH-203ENST00000531764 1110 ntBASIC18.65■□□□□ 0.58
CTNND1O60716 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNND1O60716 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNND1O60716 BNIP3P29-201ENST00000598302 571 ntBASIC18.65■□□□□ 0.58
CTNND1O60716 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNND1O60716 AL022328.1-201ENST00000610050 478 ntBASIC18.65■□□□□ 0.58
CTNND1O60716 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNND1O60716 AC011447.5-201ENST00000616168 564 ntBASIC18.65■□□□□ 0.58
CTNND1O60716 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTNND1O60716 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNND1O60716 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNND1O60716 AP001282.1-201ENST00000531301 1499 ntBASIC18.65■□□□□ 0.58
CTNND1O60716 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTNND1O60716 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTNND1O60716 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTNND1O60716 PDIA3P1-201ENST00000471856 1510 ntBASIC18.64■□□□□ 0.58
CTNND1O60716 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.64■□□□□ 0.58
CTNND1O60716 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTNND1O60716 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTNND1O60716 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTNND1O60716 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CTNND1O60716 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 AC134915.1-201ENST00000426461 574 ntBASIC18.64■□□□□ 0.57
CTNND1O60716 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CTNND1O60716 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 KRT18P64-201ENST00000434946 1219 ntBASIC18.64■□□□□ 0.57
CTNND1O60716 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.64■□□□□ 0.57
CTNND1O60716 RPL13AP25-201ENST00000484130 612 ntBASIC18.64■□□□□ 0.57
CTNND1O60716 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.64■□□□□ 0.57
CTNND1O60716 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.64■□□□□ 0.57
CTNND1O60716 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.64■□□□□ 0.57
CTNND1O60716 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 AC022211.2-201ENST00000585075 2527 ntBASIC18.64■□□□□ 0.57
CTNND1O60716 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTNND1O60716 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.64■□□□□ 0.57
CTNND1O60716 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CTNND1O60716 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNND1O60716 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNND1O60716 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNND1O60716 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.63■□□□□ 0.57
CTNND1O60716 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms