Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RNF13O43567 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF13O43567 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF13O43567 AC093724.1-201ENST00000448659 1027 ntBASIC14.69□□□□□ -0.06
RNF13O43567 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RNF13O43567 AC112191.1-201ENST00000523689 701 ntBASIC14.69□□□□□ -0.06
RNF13O43567 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.69□□□□□ -0.06
RNF13O43567 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF13O43567 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RNF13O43567 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RNF13O43567 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 AL136379.1-201ENST00000623471 2642 ntBASIC14.69□□□□□ -0.06
RNF13O43567 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF13O43567 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF13O43567 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF13O43567 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNF13O43567 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RNF13O43567 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF13O43567 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF13O43567 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
RNF13O43567 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF13O43567 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RNF13O43567 PPT1-215ENST00000641471 2368 ntBASIC14.68□□□□□ -0.06
RNF13O43567 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF13O43567 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF13O43567 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF13O43567 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RNF13O43567 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 MIR648-201ENST00000385046 94 ntBASIC14.68□□□□□ -0.06
RNF13O43567 MIR940-201ENST00000401276 94 ntBASIC14.68□□□□□ -0.06
RNF13O43567 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF13O43567 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF13O43567 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF13O43567 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
RNF13O43567 AC092865.6-201ENST00000642101 219 ntBASIC14.68□□□□□ -0.06
RNF13O43567 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RNF13O43567 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RNF13O43567 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF13O43567 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RNF13O43567 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
RNF13O43567 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RNF13O43567 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF13O43567 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF13O43567 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF13O43567 AC069224.1-201ENST00000566372 1715 ntBASIC14.67□□□□□ -0.06
RNF13O43567 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF13O43567 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.67□□□□□ -0.06
RNF13O43567 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms