Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FOXN1O15353 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXN1O15353 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.11■□□□□ 0.65
FOXN1O15353 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.11■□□□□ 0.65
FOXN1O15353 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN1O15353 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.11■□□□□ 0.65
FOXN1O15353 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN1O15353 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN1O15353 TMEM198B-204ENST00000484016 896 ntBASIC19.11■□□□□ 0.65
FOXN1O15353 SDHAP3-202ENST00000515467 728 ntBASIC19.11■□□□□ 0.65
FOXN1O15353 RRP7BP-205ENST00000566851 833 ntBASIC19.11■□□□□ 0.65
FOXN1O15353 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN1O15353 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
FOXN1O15353 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FOXN1O15353 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
FOXN1O15353 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
FOXN1O15353 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
FOXN1O15353 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXN1O15353 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.1■□□□□ 0.65
FOXN1O15353 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXN1O15353 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.1■□□□□ 0.65
FOXN1O15353 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.1■□□□□ 0.65
FOXN1O15353 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.1■□□□□ 0.65
FOXN1O15353 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.1■□□□□ 0.65
FOXN1O15353 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
FOXN1O15353 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN1O15353 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
FOXN1O15353 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
FOXN1O15353 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
FOXN1O15353 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXN1O15353 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXN1O15353 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 SLC22A20-204ENST00000530038 1673 ntBASIC19.09■□□□□ 0.65
FOXN1O15353 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXN1O15353 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 AC091046.1-201ENST00000331871 207 ntBASIC19.09■□□□□ 0.65
FOXN1O15353 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
FOXN1O15353 AL662890.1-201ENST00000396818 632 ntBASIC19.09■□□□□ 0.65
FOXN1O15353 AL355334.1-201ENST00000417713 215 ntBASIC19.09■□□□□ 0.65
FOXN1O15353 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
FOXN1O15353 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXN1O15353 BCRP2-202ENST00000447763 634 ntBASIC19.09■□□□□ 0.65
FOXN1O15353 AC104306.2-201ENST00000451877 341 ntBASIC19.09■□□□□ 0.65
FOXN1O15353 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXN1O15353 BCRP6-201ENST00000510112 632 ntBASIC19.09■□□□□ 0.65
FOXN1O15353 BCRP7-201ENST00000511549 544 ntBASIC19.09■□□□□ 0.65
FOXN1O15353 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXN1O15353 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.09■□□□□ 0.65
FOXN1O15353 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXN1O15353 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXN1O15353 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXN1O15353 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXN1O15353 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms