Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPHP1O15259 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC20.2■□□□□ 0.82
NPHP1O15259 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NPHP1O15259 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.2■□□□□ 0.82
NPHP1O15259 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NPHP1O15259 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.2■□□□□ 0.82
NPHP1O15259 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.2■□□□□ 0.82
NPHP1O15259 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.2■□□□□ 0.82
NPHP1O15259 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.2■□□□□ 0.82
NPHP1O15259 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.2■□□□□ 0.82
NPHP1O15259 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.2■□□□□ 0.82
NPHP1O15259 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NPHP1O15259 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.2■□□□□ 0.82
NPHP1O15259 AC036164.1-201ENST00000570544 333 ntBASIC20.2■□□□□ 0.82
NPHP1O15259 MIR4525-201ENST00000580000 75 ntBASIC20.2■□□□□ 0.82
NPHP1O15259 RN7SL219P-201ENST00000582872 296 ntBASIC20.2■□□□□ 0.82
NPHP1O15259 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.2■□□□□ 0.82
NPHP1O15259 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.2■□□□□ 0.82
NPHP1O15259 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.2■□□□□ 0.82
NPHP1O15259 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NPHP1O15259 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPHP1O15259 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NPHP1O15259 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.19■□□□□ 0.82
NPHP1O15259 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.19■□□□□ 0.82
NPHP1O15259 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.19■□□□□ 0.82
NPHP1O15259 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 FAM86MP-201ENST00000340703 885 ntBASIC20.19■□□□□ 0.82
NPHP1O15259 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.19■□□□□ 0.82
NPHP1O15259 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.19■□□□□ 0.82
NPHP1O15259 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.19■□□□□ 0.82
NPHP1O15259 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.19■□□□□ 0.82
NPHP1O15259 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.19■□□□□ 0.82
NPHP1O15259 FAM8A2P-201ENST00000528813 1142 ntBASIC20.19■□□□□ 0.82
NPHP1O15259 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.19■□□□□ 0.82
NPHP1O15259 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.19■□□□□ 0.82
NPHP1O15259 BTNL10-201ENST00000595971 695 ntBASIC20.19■□□□□ 0.82
NPHP1O15259 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.19■□□□□ 0.82
NPHP1O15259 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.19■□□□□ 0.82
NPHP1O15259 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NPHP1O15259 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 AL603756.1-201ENST00000606511 2163 ntBASIC20.19■□□□□ 0.82
NPHP1O15259 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
NPHP1O15259 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.19■□□□□ 0.82
NPHP1O15259 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.19■□□□□ 0.82
NPHP1O15259 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPHP1O15259 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NPHP1O15259 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.18■□□□□ 0.82
NPHP1O15259 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NPHP1O15259 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.18■□□□□ 0.82
NPHP1O15259 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 BNIP3P42-201ENST00000454982 569 ntBASIC20.18■□□□□ 0.82
NPHP1O15259 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.18■□□□□ 0.82
NPHP1O15259 AC119751.2-201ENST00000504529 210 ntBASIC20.18■□□□□ 0.82
NPHP1O15259 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.18■□□□□ 0.82
NPHP1O15259 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.18■□□□□ 0.82
NPHP1O15259 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.18■□□□□ 0.82
NPHP1O15259 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.18■□□□□ 0.82
NPHP1O15259 BNIP3P29-201ENST00000598302 571 ntBASIC20.18■□□□□ 0.82
NPHP1O15259 AC011447.5-201ENST00000616168 564 ntBASIC20.18■□□□□ 0.82
NPHP1O15259 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 AC018665.1-201ENST00000622927 1362 ntBASIC20.18■□□□□ 0.82
NPHP1O15259 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPHP1O15259 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms