Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA3EO15041 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA3EO15041 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.2■□□□□ 0.66
SEMA3EO15041 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA3EO15041 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA3EO15041 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SEMA3EO15041 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.2■□□□□ 0.66
SEMA3EO15041 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SEMA3EO15041 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.2■□□□□ 0.66
SEMA3EO15041 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SEMA3EO15041 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.2■□□□□ 0.66
SEMA3EO15041 AC106886.1-201ENST00000568660 600 ntBASIC19.2■□□□□ 0.66
SEMA3EO15041 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA3EO15041 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA3EO15041 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SEMA3EO15041 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.2■□□□□ 0.66
SEMA3EO15041 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA3EO15041 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA3EO15041 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.2■□□□□ 0.66
SEMA3EO15041 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.2■□□□□ 0.66
SEMA3EO15041 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.2■□□□□ 0.66
SEMA3EO15041 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.2■□□□□ 0.66
SEMA3EO15041 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SEMA3EO15041 PCDHA14-201ENST00000506751 2298 ntBASIC19.2■□□□□ 0.66
SEMA3EO15041 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SEMA3EO15041 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SEMA3EO15041 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.19■□□□□ 0.66
SEMA3EO15041 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SEMA3EO15041 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 FAM86LP-201ENST00000478302 853 ntBASIC19.19■□□□□ 0.66
SEMA3EO15041 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.19■□□□□ 0.66
SEMA3EO15041 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.19■□□□□ 0.66
SEMA3EO15041 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.19■□□□□ 0.66
SEMA3EO15041 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 BRI3BPP1-201ENST00000594224 787 ntBASIC19.19■□□□□ 0.66
SEMA3EO15041 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA3EO15041 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.19■□□□□ 0.66
SEMA3EO15041 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA3EO15041 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA3EO15041 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA3EO15041 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA3EO15041 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA3EO15041 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA3EO15041 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.18■□□□□ 0.66
SEMA3EO15041 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SEMA3EO15041 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SEMA3EO15041 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA3EO15041 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SEMA3EO15041 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.18■□□□□ 0.66
SEMA3EO15041 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.18■□□□□ 0.66
SEMA3EO15041 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.18■□□□□ 0.66
SEMA3EO15041 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.18■□□□□ 0.66
SEMA3EO15041 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.18■□□□□ 0.66
SEMA3EO15041 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.18■□□□□ 0.66
SEMA3EO15041 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.18■□□□□ 0.66
SEMA3EO15041 AL162274.1-201ENST00000617191 1098 ntBASIC19.18■□□□□ 0.66
SEMA3EO15041 AL033527.5-201ENST00000641382 801 ntBASIC19.18■□□□□ 0.66
SEMA3EO15041 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA3EO15041 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA3EO15041 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA3EO15041 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.18■□□□□ 0.66
SEMA3EO15041 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SEMA3EO15041 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SEMA3EO15041 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SEMA3EO15041 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.17■□□□□ 0.66
SEMA3EO15041 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SEMA3EO15041 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SEMA3EO15041 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA3EO15041 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms