Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
O00370 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.15■□□□□ 0.34
O00370 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
O00370 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
O00370 KRT18P28-201ENST00000453838 1332 ntBASIC17.15■□□□□ 0.34
O00370 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.15■□□□□ 0.34
O00370 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.15■□□□□ 0.34
O00370 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
O00370 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.15■□□□□ 0.34
O00370 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
O00370 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
O00370 AC112504.1-201ENST00000623415 1841 ntBASIC17.14■□□□□ 0.34
O00370 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.14■□□□□ 0.33
O00370 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
O00370 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.14■□□□□ 0.33
O00370 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.14■□□□□ 0.33
O00370 LINC02447-202ENST00000501888 2146 ntBASIC17.14■□□□□ 0.33
O00370 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.14■□□□□ 0.33
O00370 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.14■□□□□ 0.33
O00370 AC069224.1-201ENST00000566372 1715 ntBASIC17.14■□□□□ 0.33
O00370 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.14■□□□□ 0.33
O00370 AL353705.2-201ENST00000428243 662 ntBASIC17.14■□□□□ 0.33
O00370 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.14■□□□□ 0.33
O00370 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.14■□□□□ 0.33
O00370 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.14■□□□□ 0.33
O00370 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.14■□□□□ 0.33
O00370 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.14■□□□□ 0.33
O00370 AC007967.4-201ENST00000614700 386 ntBASIC17.14■□□□□ 0.33
O00370 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.14■□□□□ 0.33
O00370 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.14■□□□□ 0.33
O00370 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
O00370 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.14■□□□□ 0.33
O00370 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.14■□□□□ 0.33
O00370 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
O00370 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
O00370 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 PRAL-201ENST00000624952 3286 ntBASIC17.13■□□□□ 0.33
O00370 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.13■□□□□ 0.33
O00370 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
O00370 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.13■□□□□ 0.33
O00370 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
O00370 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.13■□□□□ 0.33
O00370 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.13■□□□□ 0.33
O00370 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
O00370 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.13■□□□□ 0.33
O00370 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
O00370 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
O00370 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.13■□□□□ 0.33
O00370 SPDYE7P-202ENST00000420373 878 ntBASIC17.13■□□□□ 0.33
O00370 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.13■□□□□ 0.33
O00370 METTL21AP1-201ENST00000438852 635 ntBASIC17.13■□□□□ 0.33
O00370 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.13■□□□□ 0.33
O00370 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.13■□□□□ 0.33
O00370 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.13■□□□□ 0.33
O00370 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.13■□□□□ 0.33
O00370 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
O00370 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.13■□□□□ 0.33
O00370 MIR4453-201ENST00000584019 89 ntBASIC17.13■□□□□ 0.33
O00370 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 AC003101.2-201ENST00000612557 442 ntBASIC17.13■□□□□ 0.33
O00370 AC093028.1-201ENST00000622998 982 ntBASIC17.13■□□□□ 0.33
O00370 Z92544.3-201ENST00000624747 417 ntBASIC17.13■□□□□ 0.33
O00370 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.13■□□□□ 0.33
O00370 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.13■□□□□ 0.33
O00370 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 AL136982.4-201ENST00000437689 1740 ntBASIC17.13■□□□□ 0.33
O00370 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
O00370 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
O00370 AP003680.1-201ENST00000598970 3660 ntBASIC17.12■□□□□ 0.33
O00370 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms