Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC188H7C350 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.73■□□□□ 0.27
CCDC188H7C350 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.73■□□□□ 0.27
CCDC188H7C350 AL513480.1-201ENST00000451731 511 ntBASIC16.73■□□□□ 0.27
CCDC188H7C350 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC188H7C350 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC188H7C350 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 AC002347.1-201ENST00000569543 541 ntBASIC16.73■□□□□ 0.27
CCDC188H7C350 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 LINC01711-201ENST00000598340 967 ntBASIC16.73■□□□□ 0.27
CCDC188H7C350 AL078644.1-201ENST00000609881 752 ntBASIC16.73■□□□□ 0.27
CCDC188H7C350 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 AC126365.1-201ENST00000578585 1514 ntBASIC16.73■□□□□ 0.27
CCDC188H7C350 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 KRT8P44-201ENST00000441609 1350 ntBASIC16.73■□□□□ 0.27
CCDC188H7C350 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC188H7C350 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
CCDC188H7C350 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC188H7C350 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC188H7C350 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC188H7C350 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CCDC188H7C350 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CCDC188H7C350 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 GPX1P2-201ENST00000429271 606 ntBASIC16.72■□□□□ 0.27
CCDC188H7C350 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC188H7C350 FAM210CP-201ENST00000445714 574 ntBASIC16.72■□□□□ 0.27
CCDC188H7C350 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCDC188H7C350 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC188H7C350 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC188H7C350 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC188H7C350 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC188H7C350 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
CCDC188H7C350 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC188H7C350 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCDC188H7C350 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CCDC188H7C350 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC188H7C350 CICP23-201ENST00000605013 2741 ntBASIC16.72■□□□□ 0.27
CCDC188H7C350 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC188H7C350 AC073439.1-201ENST00000624121 1774 ntBASIC16.72■□□□□ 0.27
CCDC188H7C350 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC188H7C350 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
CCDC188H7C350 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 AC091951.1-201ENST00000512854 2465 ntBASIC16.71■□□□□ 0.27
CCDC188H7C350 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC188H7C350 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CCDC188H7C350 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CCDC188H7C350 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 PRSS29P-201ENST00000440800 595 ntBASIC16.71■□□□□ 0.27
CCDC188H7C350 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC188H7C350 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms