Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPB4C9JG80 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 PRAL-201ENST00000624952 3286 ntBASIC14.17□□□□□ -0.14
NPIPB4C9JG80 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 AC132872.4-202ENST00000622924 2756 ntBASIC14.17□□□□□ -0.14
NPIPB4C9JG80 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 AC090616.6-203ENST00000579186 1945 ntBASIC14.17□□□□□ -0.14
NPIPB4C9JG80 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 AC018892.3-201ENST00000623986 2499 ntBASIC14.17□□□□□ -0.14
NPIPB4C9JG80 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB4C9JG80 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 AC087481.3-201ENST00000602886 1894 ntBASIC14.16□□□□□ -0.14
NPIPB4C9JG80 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 AL133215.2-201ENST00000609242 977 ntBASIC14.16□□□□□ -0.14
NPIPB4C9JG80 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 KRT8P12-202ENST00000472924 1397 ntBASIC14.16□□□□□ -0.14
NPIPB4C9JG80 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.16□□□□□ -0.14
NPIPB4C9JG80 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPB4C9JG80 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms