Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 AL512652.2-201ENST00000625156 1716 ntBASIC15.09■□□□□ 0.01
CLCA1A8K7I4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCA1A8K7I4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.08■□□□□ 0.01
CLCA1A8K7I4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.08■□□□□ 0
CLCA1A8K7I4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.08■□□□□ 0
CLCA1A8K7I4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.08■□□□□ 0
CLCA1A8K7I4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.08■□□□□ 0
CLCA1A8K7I4 FAM45BP-202ENST00000592932 1624 ntBASIC15.08■□□□□ 0
CLCA1A8K7I4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
CLCA1A8K7I4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.08■□□□□ 0
CLCA1A8K7I4 HMGA1P7-201ENST00000406908 502 ntBASIC15.08■□□□□ 0
CLCA1A8K7I4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
CLCA1A8K7I4 HCG4-201ENST00000418983 998 ntBASIC15.08■□□□□ 0
CLCA1A8K7I4 CNN2P11-201ENST00000429351 262 ntBASIC15.08■□□□□ 0
CLCA1A8K7I4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.08■□□□□ 0
CLCA1A8K7I4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.08■□□□□ 0
CLCA1A8K7I4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.08■□□□□ 0
CLCA1A8K7I4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.08■□□□□ 0
CLCA1A8K7I4 AC091167.2-201ENST00000579581 588 ntBASIC15.08■□□□□ 0
CLCA1A8K7I4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.08■□□□□ 0
CLCA1A8K7I4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.08■□□□□ 0
CLCA1A8K7I4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLCA1A8K7I4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLCA1A8K7I4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLCA1A8K7I4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 AL031731.1-201ENST00000642131 2094 ntBASIC15.08■□□□□ 0
CLCA1A8K7I4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.08■□□□□ 0
CLCA1A8K7I4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.08■□□□□ 0
CLCA1A8K7I4 SNX33P1-201ENST00000592116 1762 ntBASIC15.08■□□□□ 0
CLCA1A8K7I4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.08■□□□□ 0
CLCA1A8K7I4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.08■□□□□ 0
CLCA1A8K7I4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCA1A8K7I4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
CLCA1A8K7I4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.07■□□□□ 0
CLCA1A8K7I4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CLCA1A8K7I4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.07■□□□□ 0
CLCA1A8K7I4 POU5F1P6-201ENST00000466990 990 ntBASIC15.07■□□□□ 0
CLCA1A8K7I4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.07■□□□□ 0
CLCA1A8K7I4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.07■□□□□ 0
CLCA1A8K7I4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLCA1A8K7I4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.07■□□□□ 0
CLCA1A8K7I4 LINC02084-201ENST00000606069 1096 ntBASIC15.07■□□□□ 0
CLCA1A8K7I4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.07■□□□□ 0
CLCA1A8K7I4 FLJ16779-201ENST00000612722 7638 ntBASIC15.07■□□□□ 0
CLCA1A8K7I4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms